DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk12 and cdk2

DIOPT Version :10

Sequence 1:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_998571.1 Gene:cdk2 / 406715 ZFINID:ZDB-GENE-040426-2741 Length:298 Species:Danio rerio


Alignment Length:316 Identity:129/316 - (40%)
Similarity:191/316 - (60%) Gaps:25/316 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   801 VDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVN 865
            ::.|:.:.:|||||||.||||::..|.:.|||||:||:.|.||.|.||:|||.:|::|||.|||.
Zfish     1 MESFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65

  Fly   866 LHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVD-FNEENNASIMKQLLDGLNYCHK 929
            |.:::          ..:...|||||::..||...::|..|. .:.....|.:.|||.||.:||.
Zfish    66 LRDVI----------HTENKLYLVFEFLHQDLKRFMDSTSVSGISLPLVKSYLFQLLQGLAFCHS 120

  Fly   930 KNFLHRDIKCSNILMNNRGKVKLADFGLARLYNADDRERPYTNKVITLWYRPPELLLGEERYGPS 994
            ...||||:|..|:|:|.:|::|||||||||.:...  .|.||::|:|||||.||:|||.:.|..:
Zfish   121 HRVLHRDLKPQNLLINAQGEIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCKYYSTA 183

  Fly   995 IDVWSCGCILGELFVKRPLFQANAEMAQLETISKICGSPVPAVWPNVIKLPLFHTLKQKKTHRRR 1059
            :|:||.|||..|:..:|.||..::|:.||..|.:..|:|..::||.|..:|.:     |.:..:.
Zfish   184 VDIWSLGCIFAEMITRRALFPGDSEIDQLFRIFRTLGTPDESIWPGVTSMPDY-----KPSFPKW 243

  Fly  1060 LREDFEFMPAP----ALDLLDKMLDLDPDKRITAEDALRSPWLRKINPDEMPTPQL 1111
            .|:|...:..|    ..|||.:||..||:|||:|::||...:.|.:.   ||.|.|
Zfish   244 ARQDLSKVVPPLDEDGRDLLGQMLTYDPNKRISAKNALVHRFFRDVT---MPVPPL 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 124/301 (41%)
cdk2NP_998571.1 STKc_CDK2_3 3..286 CDD:270844 124/299 (41%)

Return to query results.
Submit another query.