DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk12 and C34E11.4

DIOPT Version :9

Sequence 1:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001024440.1 Gene:C34E11.4 / 3565303 WormBaseID:WBGene00007937 Length:130 Species:Caenorhabditis elegans


Alignment Length:80 Identity:20/80 - (25%)
Similarity:35/80 - (43%) Gaps:19/80 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   909 NE--ENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNADDR-ERP- 969
            ||  ||..|.:|...:..|:    :.|.:.:..|...:.:..:|:.|.|. |:|...|.: ||| 
 Worm    21 NEIVENQMSAIKSAAESNNF----SLLLKLVSPSVFELEDGERVRKAFFS-AKLLLMDSKFERPG 80

  Fly   970 ----------YTNKV 974
                      ||:::
 Worm    81 IVATVTESGKYTSQI 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 20/80 (25%)
S_TKc 804..1098 CDD:214567 20/80 (25%)
C34E11.4NP_001024440.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0600
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.