DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdk12 and pom1

DIOPT Version :9

Sequence 1:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_592974.1 Gene:pom1 / 2541889 PomBaseID:SPAC2F7.03c Length:1087 Species:Schizosaccharomyces pombe


Alignment Length:1176 Identity:260/1176 - (22%)
Similarity:416/1176 - (35%) Gaps:362/1176 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 SMSDNDINALLDRRYTPPTAPSKS-----------NERTVSAAPS---SFTPHNLKESSSPA-TP 218
            |:.|.:.:||    :...|:..||           |...:||..|   ...|:....||:.| |.
pombe    11 SLGDENTDAL----FKLHTSNRKSANMFGIKSELLNPSELSAVGSYSNDICPNRQSSSSTAADTS 71

  Fly   219 PPVRRPNTN-----SNYYGESSLETANSALGSNLQ---VTVTNKQSISNRLRSPPPSSRSSGNG- 274
            |.....|||     ..:..|..:......:||::.   :|:                ..|:||| 
pombe    72 PSTNASNTNISFPEQEHKDELFMNVEPKGVGSSMDNHAITI----------------HHSTGNGL 120

  Fly   275 --------PRFGNSPRTPPPSHYSSSGGGGVGSGSVVRDSRSSRYVNSPHKEDVSAHHRSS---- 327
                    .|..||||.  ..|..|:    :..|:...|..||:. |:|...:.|:|||:|    
pombe   121 LRSSFDHDYRQKNSPRN--SIHRLSN----ISIGNNPIDFESSQQ-NNPSSLNTSSHHRTSSISN 178

  Fly   328 -----------------HDHGYQ---GRYSGAGSSSHDTRKVKRLSPELDRYNH--QPSTPPHKR 370
                             .|...|   |..||..|.:.|...|...|......||  ..|..|.:.
pombe   179 SKSFGTSLSYYNRSSKPSDWNQQNNGGHLSGVISITQDVSSVPLQSSVFSSGNHAYHASMAPKRS 243

  Fly   371 RKFSDGREVGLGNFEHSRHHSGKYERYSRDRYSRRSSRS---------PSVQHSRSRQSP----S 422
                       |::.|:..||     .|..|.:...::|         |::.||...|.|    |
pombe   244 -----------GSWRHTNFHS-----TSHPRAASIGNKSGIPPVPTIPPNIGHSTDHQHPKANIS 292

  Fly   423 GGLSSGSNA-----------------FRHGGSH--------KHKYGTTVSSTPSHTTRT-SKRAS 461
            |.|:..|:.                 |:....|        |:.:....|.|.||:..| |...:
pombe   293 GSLTKSSSESKNLSTIQSPLKTSNSFFKELSPHSQITLSNVKNNHSHVGSQTKSHSFATPSVFDN 357

  Fly   462 GTGTSGDRYSRSPRTSSRYMESSPPSP------------VGASGSHHYHHRRSPRMRQRTRGDSR 514
            ....|.|.::.:..:|..:.:|..|.|            |....:|...|..:.:...:::..|.
pombe   358 NKPVSSDNHNNTTTSSQVHPDSRNPDPKAAPKAVSQKTNVDGHRNHEAKHGNTVQNESKSQKSSN 422

  Fly   515 RRSPSSAS---SESSASRSRSPTSRDLKHKREE----------YIKKISETSLFAELVKDRHKRQ 566
            :...||..   |..|.|||.|...:..|.|.|:          ||...|..|.:....|...:.:
pombe   423 KEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHEDAPDVPAIPHAYIADSSTKSSYRNGKKTPTRTK 487

  Fly   567 KALKEIIE----RQEENSNSNSNGA-------LTINDNSSSVDGNTP-----------NAADGRS 609
            ..:::.|.    .:|.:||.||:.|       |:|..:..|.:...|           |..|...
pombe   488 SRMQQFINWFKPSKERSSNGNSDSASPPPVPRLSITRSQVSREPEKPEEIPSVPPLPSNFKDKGH 552

  Fly   610 APG----SGTPAAASTTSNGLQALGSKPDLDLNNIPMPNKQND---SVVSNPASNADVPDSVAQL 667
            .|.    |.||..:|.||..||...|....::.:.|...|..|   ..:::...|..:.|  |::
pombe   553 VPQQRSVSYTPKRSSDTSESLQPSLSFASSNVLSEPFDRKVADLAMKAINSKRINKLLDD--AKV 615

  Fly   668 KQPLL-----VPPFSASKNNIKPKSLTSLPL----PPGMNVLD---LAGARSPSPGQKKESDEKN 720
            .|.||     :.|.    .|.:.:.:.:.||    ...:|..|   ..|.|:.   .|:.|.::|
pombe   616 MQSLLDRACIITPV----RNTEVQLINTAPLTEYEQDEINNYDNIYFTGLRNV---DKRRSADEN 673

  Fly   721 VTSSGSANKSVLNLPMPPVIPGSEELSGDDDVIDSPEDFDAPAVGTVHGHGGGPGTTRQRPVILN 785
            .:|:.                |.::..||..|:                                
pombe   674 TSSNF----------------GFDDERGDYKVV-------------------------------- 690

  Fly   786 RRDSRNNVRDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVR 850
                      .|:.....:|::..:|:|::|||.:..|:.|..:||||.:|   .|:.|.:.|:.
pombe   691 ----------LGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKLVALKIIR---NKKRFHMQALV 742

  Fly   851 EIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDH-----------DLMGLLESG 904
            |.|||:::..          .|..|.          |.:.:|.||           :|:|   ..
pombe   743 ETKILQKIRE----------WDPLDE----------YCMVQYTDHFYFRDHLCVATELLG---KN 784

  Fly   905 MVDFNEENN---------ASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNN--RGKVKLADFGLA 958
            :.:..:.|.         .||.:||:..|...::|:.:|.|:|..|||:.:  :.:||:.|||  
pombe   785 LYELIKSNGFKGLPIVVIKSITRQLIQCLTLLNEKHVIHCDLKPENILLCHPFKSQVKVIDFG-- 847

  Fly   959 RLYNADDRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQL 1023
              .:..:.|..|| .:.:.:||.||::|| ..||..|||||.|||:.|::...|||....|..||
pombe   848 --SSCFEGECVYT-YIQSRFYRSPEVILG-MGYGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQL 908

  Fly  1024 ETISKICGSPVPAVWPNVIKLPLFHT--------LKQKKTHRR----RLREDFEFMPAPALDLLD 1076
            ..|.:|.|.|..::.....:..:|..        :..|...||    .|.:..:......|..:.
pombe   909 ACIMEIFGPPDHSLIDKCSRKKVFFDSSGKPRPFVSSKGVSRRPFSKSLHQVLQCKDVSFLSFIS 973

  Fly  1077 KMLDLDPDKRITAEDALRSPWL------RKIN-----------------PDEMPTPQLPTWQDCH 1118
            ..|..|||:|:|.:.|.:..:|      |:.|                 |...|.|.||...:.|
pombe   974 DCLKWDPDERMTPQQAAQHDFLTGKQDVRRPNTAPARQKFARPPNIETAPIPRPLPNLPMEYNDH 1038

  Fly  1119 ELWSKK 1124
            .|.|.|
pombe  1039 TLPSPK 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 90/335 (27%)
S_TKc 804..1098 CDD:214567 89/327 (27%)
pom1NP_592974.1 PKc_DYRK 685..995 CDD:271112 93/383 (24%)
S_TKc 699..995 CDD:214567 89/327 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52113
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.