DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and cdk-1

DIOPT Version :10

Sequence 1:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:NP_001022747.1 Gene:cdk-1 / 176374 WormBaseID:WBGene00000405 Length:332 Species:Caenorhabditis elegans


Alignment Length:318 Identity:122/318 - (38%)
Similarity:180/318 - (56%) Gaps:27/318 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   804 FEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHE 868
            |..:.:|||||||.|||.::..||.|||:||:|||.|.||.|.||||||.:|::|.|.|:|.|..
 Worm    22 FTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEA 86

  Fly   869 IVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLES-GMVDFNE-ENNASIMKQLLDGLNYCHKKN 931
            ::          ..:...:|:||::..||...::. |..::.. |...|...|:|..:.:||::.
 Worm    87 VI----------MQENRLFLIFEFLSFDLKRYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRR 141

  Fly   932 FLHRDIKCSNILMNNRGKVKLADFGLARLYNADDRERPYTNKVITLWYRPPELLLGEERYGPSID 996
            .:|||:|..|:|::|.|.:|||||||||.....  .|.||::|:|||||.||:|:|.:||...:|
 Worm   142 VIHRDLKPQNLLVDNNGAIKLADFGLARAIGIP--IRVYTHEVVTLWYRAPEILMGAQRYSMGVD 204

  Fly   997 VWSCGCILGELFVKRPLFQANAEMAQLETISKICGSPVPAVWPNVIKLPLFHTLKQKKTHRRRLR 1061
            :||.|||..|:..|:||||.::|:.:|..|.::.|:|....|..|..||.:.. ...|.....||
 Worm   205 MWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKA-TFPKWRENFLR 268

  Fly  1062 EDF-------EFMPAPALDLLDKMLDLDPDKRITAEDALRSPWLRKINPDEMPTPQLP 1112
            :.|       ..:...|..||:.:|..||..|:.|:.||..|:.     |.|.|.:||
 Worm   269 DKFYDKKTGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYF-----DNMDTSKLP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 117/302 (39%)
cdk-1NP_001022747.1 STKc_CDK1_euk 21..312 CDD:270845 117/302 (39%)

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