DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdk12 and LOC100536316

DIOPT Version :10

Sequence 1:NP_649325.2 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster
Sequence 2:XP_021334474.1 Gene:LOC100536316 / 100536316 -ID:- Length:482 Species:Danio rerio


Alignment Length:491 Identity:159/491 - (32%)
Similarity:234/491 - (47%) Gaps:105/491 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 KSLTSLPLPPGMNVLD-LAGARSPSPGQKKESDEKNVTSSGSANKSV------------------ 731
            :||..||...|:...| :...:..|.|   |||:.:.|||......|                  
Zfish    23 ESLCDLPEHTGLEEGDEVTHGKMGSDG---ESDQASGTSSDEVQSPVRVRMRNLHQRISNEDINK 84

  Fly   732 -LNLPMPPVIPGS--EELSGDDDVIDSPEDFDAPAVGTVHGHGGGPGTTRQRPVILNRRDSRNNV 793
             |:||....:|..  ::.:.:....|.|                           |:||..|.::
Zfish    85 RLSLPADIRLPEGYLKKFASNSPPFDKP---------------------------LSRRLRRTSL 122

  Fly   794 RDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQL 858
            .:.|...::.:..:.::|||||..|||.|...|:::||||::|||:| ||.|.||:||:.:|:.|
Zfish   123 SEIGFGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEYE-EGAPCTAIREVSLLKNL 186

  Fly   859 NHRNIVNLHEIV-TDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEENNASIMK---- 918
            .|.|||.||:|: |:|           ...|||||:|.||...|         :|..|||.    
Zfish   187 KHANIVTLHDIIHTEK-----------CLTLVFEYLDRDLKQYL---------DNCGSIMSIYNV 231

  Fly   919 -----QLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNADDRERPYTNKVITLW 978
                 |||.||.|||.:..||||:|..|:|:|::|::|||||||||..:..  .:.::|:|:|||
Zfish   232 KIFLFQLLRGLAYCHSQKVLHRDLKPQNLLINDKGELKLADFGLARAKSVP--TKTFSNEVVTLW 294

  Fly   979 YRPPELLLGEERYGPSIDVWSCGCILGELFVKRPLFQANAEMAQLETISKICGSPVPAVWPNVIK 1043
            ||||::|||...|...||:|..|||..|:...||||..:....:|..|.:|.|||....||....
Zfish   295 YRPPDVLLGSTEYSTPIDIWGVGCIFYEMITGRPLFPGSTVEDELHLIFRILGSPTEDSWPEAYS 359

  Fly  1044 LPLFHTLKQKK-------THRRRLREDFEFMPAPALDLLDKMLDLDPDKRITAEDALRSPWLRKI 1101
            ...|.:.:..:       ||..|:..|       ..|||.::|..|..:|::||.|||..:.|.:
Zfish   360 NENFLSYRFPQYDGEPLVTHAPRITND-------GHDLLCQLLQFDARRRVSAEAALRHVYFRDL 417

  Fly  1102 NPDEMPTPQLPTWQDCHELWSKKRRRQMREQQESLP 1137
            . |::  .|||   |...::|.|..|...:..:..|
Zfish   418 G-DKV--HQLP---DTTSIFSIKEIRLQNDPGKHFP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdk12NP_649325.2 STKc_CDK12 796..1098 CDD:270847 124/318 (39%)
LOC100536316XP_021334474.1 Protein Kinases, catalytic domain 127..414 CDD:473864 123/316 (39%)

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