DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SAK and Plk5

DIOPT Version :9

Sequence 1:NP_649324.1 Gene:SAK / 40384 FlyBaseID:FBgn0026371 Length:769 Species:Drosophila melanogaster
Sequence 2:XP_006240983.1 Gene:Plk5 / 314627 RGDID:1305038 Length:614 Species:Rattus norvegicus


Alignment Length:589 Identity:150/589 - (25%)
Similarity:226/589 - (38%) Gaps:157/589 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTG---LTNRVRQEVEIHSRLKHPSVL 75
            |....|:|||.|:..||...:.|....|:|::.:   .|.|   |..:|.:|:.:||||.|.:::
  Rat    27 YRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPR---GGAGRLRLRGKVEREIALHSRLHHRNIV 88

  Fly    76 QLYTFFQDANYVYLVLELAHNGELHRYMNHIARPFTETEAASILKQVVAGLLYLHSHNIMHRDIS 140
            ..:..|.|.::||:|||......|...:. :.|..||.|.....:.:|:||.|||...|:|||:.
  Rat    89 AFHAHFADRDHVYMVLEYCSRQSLAHVLK-VRRTLTEPEVRYYFRGLVSGLRYLHQQRIVHRDLK 152

  Fly   141 LSNLLLSREMHVKIADFGLATQLKRPDERHMTMCGTPNYISPEVVSRTSHGLPADVWSVGCMLYT 205
            .||..|::.|.|||.|.|||.::......|..:|||||:.:||||||..|...:|:|::||::||
  Rat   153 PSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQAPEVVSRNGHSAKSDIWALGCIMYT 217

  Fly   206 LLVGRPPFETDAVQSTLNKVVMSEYIMPAHLSYEAQDLINKLLKKLPHERITLEAVLCHPFMLKC 270
            :|.|.|||....:......:....|:.|..||..|:.||.:||...|.||.:|:.:|...|.   
  Rat   218 VLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLIARLLAPDPDERPSLDHLLQDDFF--- 279

  Fly   271 SNG----------GHSAPGALNVFSQSMESGDSGIITFASSDSRNSQQIRSVENSGPQQVLPQIR 325
            |.|          .||.|                :..|.                      |.:.
  Rat   280 SQGFTPERLPPHSCHSPP----------------VFAFP----------------------PPLG 306

  Fly   326 EEFKQVHHKLPYEQTGLFGQASTGLAEPNWPGAAKSSAFCMEAGNVPNSKQAS-------LKEDR 383
            ..|::|            ||.......|..|..:|.::...|....|:..:||       ..|.|
  Rat   307 RLFRKV------------GQLLLTQCRPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESR 359

  Fly   384 ISVPPLNTKRLLPTRYKTKNAIMSILRNGEVVLEFLKFRPTYNEDRINDICRISDDG-------- 440
            |.:..|.|.|..|...|           |.:.|:.        |.....:|...|.|        
  Rat   360 IHLLTLGTPRTDPADAK-----------GTLALQL--------EVATRKLCLCLDAGPVGRTATP 405

  Fly   441 ---------------------QRIIIYQP----------------DPGRGLPVRE-QPPDLQIPS 467
                                 ||.:::.|                |.|.|:..|: ....|:.|.
  Rat   406 KCRTEAAWRGPKPAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQLSDGGSGVLFRDGSHMALRPPG 470

  Fly   468 GDCVYNYDNLPSKHWKKYIYGARFV-GLVKSKTPKVTYFSTLGKCQLMETMTDFEIRFYSGAKLL 531
            |...|..|.  ...|   |:..|.| |.:::|...:..|:...:.:|.|..|         |.:.
  Rat   471 GHVSYQPDQ--GTLW---IFALRDVPGPLRAKLAVLRLFACYMQRRLREEGT---------APMT 521

  Fly   532 KTPS 535
            .||:
  Rat   522 ATPA 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SAKNP_649324.1 STKc_PLK4 12..267 CDD:271088 92/255 (36%)
S_TKc 14..267 CDD:214567 92/255 (36%)
POLO_box_Plk4_1 382..497 CDD:240557 30/161 (19%)
POLO_box_Plk4_2 498..596 CDD:240558 8/38 (21%)
POLO_box_Plk4_3 657..738 CDD:240559
Plk5XP_006240983.1 STKc_PLK 25..279 CDD:271001 92/255 (36%)
S_TKc 27..279 CDD:214567 92/255 (36%)
POLO_box_1 429..516 CDD:240561 19/91 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0575
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D507604at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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