DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and plp1

DIOPT Version :10

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_012823974.1 Gene:plp1 / 613099 XenbaseID:XB-GENE-1008580 Length:305 Species:Xenopus tropicalis


Alignment Length:296 Identity:72/296 - (24%)
Similarity:113/296 - (38%) Gaps:74/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 CQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVF-----------HLRLIWIEA 178
            |..||..:|:|::|||::|..||.:||...:...|.|..:::..|           |:    |.|
 Frog     7 CVRCMVGVPFASVIATVLCFAGVALFCGCGHEALSGTEKLIETYFSKNYQEYEYLIHV----INA 67

  Fly   179 VQMIFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRV-GGRISCAV-------------- 228
            .|.:...|.......|.::|..||..|.|.::.:.......: ||.||...              
 Frog    68 FQYVIYGIAVFFFLFGIILLAEGFYTTTAIKHILGEFKPPAIKGGLISTVTGGPPKGRSPRGRQP 132

  Fly   229 --------------------LMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCTSVEH------- 266
                                |:|:||::..:|.||.....|..:||...|..|.|:..       
 Frog   133 VHTIELICRCLGKWLGHPDKLVGVTYVITILWLLIFACAAVPVYIYFNTWVTCQSIAFPGKTTTS 197

  Fly   267 -SQSCIDLTQFHFM----FPPNTKLEDMKVCEKYEIKAFCKDG-VENAEVMFILATLSTLLVLLS 325
             |..|.|...:..:    ||.       |||.. .:.|.||.. .:....:||.|.:.....|::
 Frog   198 VSTLCSDARMYGVLPWNAFPG-------KVCGT-SLLAICKTSEFQMTFHLFIAAFVGAAATLVA 254

  Fly   326 LVHYLMCLSANYAHIRDHEKFQELQEIQNLNELEYS 361
            |:|.|||||||..:   .::..|:.:.|...:.|.|
 Frog   255 LIHALMCLSANRVY---QQRVLEMGKSQETPQAESS 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 122..345 CDD:460144 68/278 (24%)
plp1XP_012823974.1 Myelin_PLP 4..265 CDD:460144 66/269 (25%)

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