DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and plp1

DIOPT Version :9

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_012823974.1 Gene:plp1 / 613099 XenbaseID:XB-GENE-1008580 Length:305 Species:Xenopus tropicalis


Alignment Length:296 Identity:72/296 - (24%)
Similarity:113/296 - (38%) Gaps:74/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 CQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVF-----------HLRLIWIEA 178
            |..||..:|:|::|||::|..||.:||...:...|.|..:::..|           |:    |.|
 Frog     7 CVRCMVGVPFASVIATVLCFAGVALFCGCGHEALSGTEKLIETYFSKNYQEYEYLIHV----INA 67

  Fly   179 VQMIFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRV-GGRISCAV-------------- 228
            .|.:...|.......|.::|..||..|.|.::.:.......: ||.||...              
 Frog    68 FQYVIYGIAVFFFLFGIILLAEGFYTTTAIKHILGEFKPPAIKGGLISTVTGGPPKGRSPRGRQP 132

  Fly   229 --------------------LMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCTSVEH------- 266
                                |:|:||::..:|.||.....|..:||...|..|.|:..       
 Frog   133 VHTIELICRCLGKWLGHPDKLVGVTYVITILWLLIFACAAVPVYIYFNTWVTCQSIAFPGKTTTS 197

  Fly   267 -SQSCIDLTQFHFM----FPPNTKLEDMKVCEKYEIKAFCKDG-VENAEVMFILATLSTLLVLLS 325
             |..|.|...:..:    ||.       |||.. .:.|.||.. .:....:||.|.:.....|::
 Frog   198 VSTLCSDARMYGVLPWNAFPG-------KVCGT-SLLAICKTSEFQMTFHLFIAAFVGAAATLVA 254

  Fly   326 LVHYLMCLSANYAHIRDHEKFQELQEIQNLNELEYS 361
            |:|.|||||||..:   .::..|:.:.|...:.|.|
 Frog   255 LIHALMCLSANRVY---QQRVLEMGKSQETPQAESS 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 123..345 CDD:279599 68/278 (24%)
plp1XP_012823974.1 Myelin_PLP 3..265 CDD:366551 66/269 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 104 1.000 Domainoid score I6619
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4706
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D390385at33208
OrthoFinder 1 1.000 - - FOG0001336
OrthoInspector 1 1.000 - - otm48187
Panther 1 1.100 - - O PTHR11683
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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