DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and PLP1

DIOPT Version :10

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_000524.3 Gene:PLP1 / 5354 HGNCID:9086 Length:277 Species:Homo sapiens


Alignment Length:349 Identity:77/349 - (22%)
Similarity:129/349 - (36%) Gaps:83/349 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ENGSLRFVDFVNKTFALLGNSPI----KKFS--LRHEPRLYCVDAYLRWI-----FTAMEQERGL 63
            |.|.|.||  |...|.|:.....    ||.|  :..:.||    ..|:||     ...::::...
Human   569 EKGYLIFV--VRFLFGLVNQERTSYLEKKLSCKISQQVRL----ELLKWIEVKAKAKKLQRQPSQ 627

  Fly    64 LELHLYADRYYYPVGIERELFTSNTL-----VKLTLSGRYDFQVETVFLPALKSLSLSSSFEIGF 123
            |||      :|....::.|.|..:.:     :::.||.|.|..|.:.   .:|:.....:..:||
Human   628 LEL------FYCLYEMQEEDFVQSAMGHFPKIEINLSTRMDHVVSSF---CIKNCHRVKTLSLGF 683

  Fly   124 DKYCNLLDGFPALEELYIREAVSELSNALLSSGTFVKCASIKRLVVFTDCPKFKEDEDHQEPCFI 188
                  |...|..||...|.:........:.....|.|:|  |||                .|.:
Human   684 ------LHNSPKEEEEEKRGSQPLDQVQCVFPDPHVACSS--RLV----------------NCCL 724

  Fly   189 APSLVYLDYSSYLSENYDLIDL----NSLVEARLNLRLLESFNNYGSS------DNDGDVYGWDF 243
            ..|.....:|| ||.|..|.:|    |:|.:..:.: |.|:..:.|.:      ...|..:...|
Human   725 TSSFCRGLFSS-LSTNQSLTELDLSDNTLGDPGMRV-LCEALQHPGCNIQRLWLGRCGLTHQCCF 787

  Fly   244 NVPFDYYGDVTNLVAGITNITTLHLSPDSLEVFHFRCKSIPVFNNLLLNLSIESNKRNGWQVMPL 308
            |        ::::::....:..|.||.::|..|..|...:.: .:||.||      :..|.|...
Human   788 N--------ISSVLSSSQKLVELDLSDNALGDFGVRLLCVGL-KHLLCNL------QKLWLVSCC 837

  Fly   309 LIRSCPNLHTLVIKVLSFSLLRFF 332
            |..:|.....||:. .:.||.|.:
Human   838 LTSACCQDLALVLS-SNHSLTRLY 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 122..345 CDD:460144 49/221 (22%)
PLP1NP_000524.3 Myelin_PLP 5..273 CDD:460144
Blue background indicates that the domain is not in the aligned region.

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