DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and gpm6aa

DIOPT Version :9

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_998365.1 Gene:gpm6aa / 368223 ZFINID:ZDB-GENE-030710-7 Length:278 Species:Danio rerio


Alignment Length:281 Identity:71/281 - (25%)
Similarity:128/281 - (45%) Gaps:31/281 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 DHSLDRYTERGGEGECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVFHL-- 171
            :..:|....:.|..|||..|:..|||.:||||::...||.:||...:...|.||.::...|.:  
Zfish     2 EEDMDEGQTQKGCMECCLKCLGGIPYPSLIATILLYAGVALFCGCGHEALSGTVTILQNYFEVIR 66

  Fly   172 -------RLIWIEAVQMIFVIIGAGMAALGFMILFVGFLATGATRYKVYRAWRSRVGGRISCAVL 229
                   ....|:.::.:...|.:.....|.:::..||..:||.: .:|..::....||...|..
Zfish    67 GPGDGLDVFTIIDIIKYVIYGIASAFFVYGILLMVEGFFTSGAIK-DLYGDFKITTCGRCVSAWF 130

  Fly   230 MGITYLLNFVWSLILCFLVVVTFIYTMFWNMC---TSVEHSQSCIDLTQFHFMFPPNTKL----- 286
            :.:||:....|..:..|..:..|||...|.:|   |.::.:..|:|..||..:.....|.     
Zfish   131 IMLTYIFMLAWLGVTAFTSLPVFIYFNIWTICQNTTVLQGASLCLDPRQFGVVPIGEEKTLCVGS 195

  Fly   287 -EDMKVCEKYEIKAFCKDGVENAEVMFILATLSTLLVLLSLVHYLMCLSANYAHIRDHEKFQELQ 350
             ...|:||..|:        :....:|:.|.......:::::||||.||||:|:::|..|.|:.:
Zfish   196 ENFFKMCESNEL--------DMTFHLFVCALAGAGAAVIAMIHYLMVLSANWAYVKDACKMQKYE 252

  Fly   351 EIQNLNELE----YSATSKDR 367
            :.::..|.|    :|..||:|
Zfish   253 DCKSKEEQELHDIHSTRSKER 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 123..345 CDD:279599 61/239 (26%)
gpm6aaNP_998365.1 Myelin_PLP 14..247 CDD:279599 61/241 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575276
Domainoid 1 1.000 102 1.000 Domainoid score I6773
eggNOG 1 0.900 - - E1_KOG4800
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3864
Inparanoid 1 1.050 112 1.000 Inparanoid score I4839
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D390385at33208
OrthoFinder 1 1.000 - - FOG0001336
OrthoInspector 1 1.000 - - otm24778
orthoMCL 1 0.900 - - OOG6_107551
Panther 1 1.100 - - O PTHR11683
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.760

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