DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and GPM6B

DIOPT Version :9

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001001995.1 Gene:GPM6B / 2824 HGNCID:4461 Length:328 Species:Homo sapiens


Alignment Length:350 Identity:86/350 - (24%)
Similarity:145/350 - (41%) Gaps:98/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PREEILLETNFEDDGGVLTRAYNGNPYNPTIQNRRRNSYRSDHSLDRY----------------- 115
            |..|...|.|.|..                 |.|:.|| |::..:.||                 
Human     3 PAMETAAEENTEQS-----------------QERKVNS-RAEMEIGRYHWMYPGSKNHQYHPVPT 49

  Fly   116 -------TERGGEGECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVF---- 169
                   ....|..|||..|:..:|||:|:||::|..||.:||...:...:.||.:::|.|    
Human    50 LGDRASPLSSPGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNA 114

  Fly   170 --HLRLIWIEAVQMIFVIIGAGMAAL----GFMILFVGFLATGATRYKVYRAWRSRVGGRISCAV 228
              |..|  .|.:|::..:| .|:|:.    |.::|..||..|.|.: :::..:::...||....:
Human   115 SDHALL--SEVIQLMQYVI-YGIASFFFLYGIILLAEGFYTTSAVK-ELHGEFKTTACGRCISGM 175

  Fly   229 LMGITYLLNFVWSLILCFLVVVTFIYTMFWNMC-----------TSVEHSQSCIDLTQFHFM--- 279
            .:.:||:|...|..:..|..|..|::...|:.|           |.||  |.|:|:.|:..:   
Human   176 FVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIPWN 238

  Fly   280 -FPPNTKLEDMKVCEKYEIKAFCKDGVEN---------AEVMFILATLSTLLVLLSLVHYLMCLS 334
             ||..                .|...:||         :..:||:|.......:::|:|:||.||
Human   239 AFPGK----------------ICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILS 287

  Fly   335 ANYAHIRDHEKFQELQEIQNLNELE 359
            :|:|:::|..|.|..|:|:...|.|
Human   288 SNWAYLKDASKMQAYQDIKAKEEQE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 123..345 CDD:279599 67/255 (26%)
GPM6BNP_001001995.1 Myelin_PLP 62..298 CDD:396024 67/257 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142558
Domainoid 1 1.000 106 1.000 Domainoid score I6572
eggNOG 1 0.900 - - E1_KOG4800
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 115 1.000 Inparanoid score I4832
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D390385at33208
OrthoFinder 1 1.000 - - FOG0001336
OrthoInspector 1 1.000 - - otm40989
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11683
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.860

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