DRSC/TRiP Functional Genomics Resources

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Protein Alignment M6 and Gpm6b

DIOPT Version :9

Sequence 1:NP_001262166.1 Gene:M6 / 40383 FlyBaseID:FBgn0037092 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001171426.1 Gene:Gpm6b / 14758 MGIID:107672 Length:328 Species:Mus musculus


Alignment Length:348 Identity:85/348 - (24%)
Similarity:147/348 - (42%) Gaps:94/348 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 PREEILLETNFEDDGGVLTRAYNGNPYNPTIQNRRRNSYRSDHSLDRY----------------- 115
            |..|...|.|.|..                 |.|:.|| |::..:.||                 
Mouse     3 PAMETAAEENTEQS-----------------QERKVNS-RAEMEIGRYHWMYPGSKNHQYRPVPT 49

  Fly   116 -TERGGE------GECCQSCMARIPYATLIATLMCLLGVGIFCFTMYRGASLTVIMVDQVF---- 169
             .:|.|.      .|||..|:..:|||:|:||::|..||.:||...:...:.||.:::|.|    
Mouse    50 LGDRAGPLSSPGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNT 114

  Fly   170 --HLRLIWIEAVQMIFVIIGAGMAAL----GFMILFVGFLATGATRYKVYRAWRSRVGGRISCAV 228
              |..|  .|.:|::..:| .|:|:.    |.::|..||..|.|.: :::..:::...||....:
Mouse   115 SDHALL--SEVIQLMQYVI-YGIASFFFLYGIILLAEGFYTTSAVK-ELHGEFKTTACGRCISGM 175

  Fly   229 LMGITYLLNFVWSLILCFLVVVTFIYTMFWNMCTSVEHSQS---------CIDLTQFHFM----F 280
            .:.:||:|...|..:..|..|..|::...|:.|..::..||         |:|:.|:..:    |
Mouse   176 FVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAF 240

  Fly   281 PPNTKLEDMKVCEKYEIKAFCKDGVEN---------AEVMFILATLSTLLVLLSLVHYLMCLSAN 336
            |..                .|...:||         :..:||:|.......:::|:|:||.||:|
Mouse   241 PGK----------------ICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSN 289

  Fly   337 YAHIRDHEKFQELQEIQNLNELE 359
            :|:::|..|.|..|:|:...|.|
Mouse   290 WAYLKDASKMQAYQDIKAKEEQE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M6NP_001262166.1 Myelin_PLP 123..345 CDD:279599 65/253 (26%)
Gpm6bNP_001171426.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 7/35 (20%)
Myelin_PLP 62..298 CDD:396024 65/255 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832406
Domainoid 1 1.000 107 1.000 Domainoid score I6511
eggNOG 1 0.900 - - E1_KOG4800
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I4803
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D390385at33208
OrthoFinder 1 1.000 - - FOG0001336
OrthoInspector 1 1.000 - - otm43060
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11683
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5557
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.890

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