DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glg1 and glg1b

DIOPT Version :10

Sequence 1:NP_001262163.1 Gene:Glg1 / 40382 FlyBaseID:FBgn0264561 Length:1107 Species:Drosophila melanogaster
Sequence 2:NP_001038860.1 Gene:glg1b / 751680 ZFINID:ZDB-GENE-060825-255 Length:524 Species:Danio rerio


Alignment Length:495 Identity:152/495 - (30%)
Similarity:239/495 - (48%) Gaps:56/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ATANTAADTLQRSRRVAIDVDNAKDMHSIIDLAECQ----DLKKLCAHHKSTDNLSMLECALTFS 72
            |.|..||.:..::||           .|...|||.|    |:.:|||.|..|:|||:|||..  .
Zfish    56 AAAAAAASSGSQTRR-----------SSSWKLAEEQACRDDVTRLCAKHTWTNNLSVLECLQ--D 107

  Fly    73 SSQLMDLPEGCQNALWMQQRQLQLPAWLESTFLPAYCPAERPKLESCLNAV----HLWSCLEQQR 133
            ..:..::...|.:.||..:..|......||..|.. |.:...:|:.|.:..    :|.|||...|
Zfish   108 KKEDTEIASDCNHLLWNYKLNLTTDPKFESVALEV-CTSTMLELKECADEERGKGYLMSCLVDHR 171

  Fly   134 LKLLQNNACHQHLRRAYESLGQDYSAVDEFYTACGPLVEENKCGRLNVDHLPSVLSQLTTVQCLQ 198
            ..:.:.. |||::.:....:..||..:..|...|...:...:||.::|.. ..:.||...:.||:
Zfish   172 ANITERQ-CHQYITKMTSIVFSDYRLICGFMDKCREDINTLQCGSISVGE-KDLHSQGDVIACLE 234

  Fly   199 ESATKTG--------IEPVCQAAINSIE------------LFRVCQEDFSSFCSQEKSGTAAGYK 243
            .:..:..        |:..|:.:|..:.            |:..|::|...||...:.|....||
Zfish   235 RALVREAEQQDKAHQIKDQCKKSIMRVAELSADDFHLDRYLYFSCRDDRERFCENTQVGEGRVYK 299

  Fly   244 CLVRHKNHPSMSSQCSARITLRDQQIGRDYRVSHGLAKACKDDIKLYHCRRGVS--EDKHVRLAQ 306
            ||..||...:||.:|...:|.|.:.|.:||:||:.||||||.|::.|.|....|  ..:..||:.
Zfish   300 CLFNHKFEEAMSEKCRNALTTRQKLIAQDYKVSYSLAKACKADLRKYRCNPDTSMPRAREARLSY 364

  Fly   307 ILLCLESVSKNGTKLAPPCLTELTDHRRMLMTDYQLSPELLNDCADDIPKFCPDEHKAQLVNGMT 371
            :||||||....|..::..|..|:.|:|||||.|:.||||::..|..:|...|...|:.       
Zfish   365 LLLCLESAVHRGRTVSGDCQAEMLDYRRMLMEDFSLSPEIVLHCRGEIEAHCSGLHRK------- 422

  Fly   372 STGGEIIHCLLEHVKARRPQRRVTAQCQRGLETLIKASDAGEDWRVDPVLRRACKPVVDVVCRDV 436
               |..:|||:...:....:..|...||..|:|||:::|.|.|:|:|..|..||:.|:...|:.:
Zfish   423 ---GRTLHCLMRVARGDTGKGAVDNLCQTALQTLIQSADPGADYRIDRALNEACESVIQTACKHI 484

  Fly   437 QGGEARVMGCLMEHIGTPVMLPDCEQALLIIEYFVARDFK 476
            :.|:..::.|||||:.|..|:.|||..||.::||::||:|
Zfish   485 RNGDPMILSCLMEHLYTEKMVQDCEHRLLELQYFISRDWK 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Glg1NP_001262163.1 Cys_rich_FGFR 257..319 CDD:425899 26/63 (41%)
Cys_rich_FGFR 323..386 CDD:425899 21/62 (34%)
Cys_rich_FGFR 397..454 CDD:425899 22/56 (39%)
Cys_rich_FGFR 458..527 CDD:425899 10/19 (53%)
Cys_rich_FGFR 534..590 CDD:425899
Cys_rich_FGFR 591..651 CDD:425899
Cys_rich_FGFR 657..712 CDD:425899
Cys_rich_FGFR 722..781 CDD:425899
Cys_rich_FGFR 783..838 CDD:425899
Cys_rich_FGFR 842..903 CDD:425899
Cys_rich_FGFR 908..967 CDD:425899
Cys_rich_FGFR 972..1027 CDD:425899
glg1bNP_001038860.1 Cys_rich_FGFR 312..377 CDD:425899 26/64 (41%)
Cys_rich_FGFR 382..434 CDD:425899 21/61 (34%)
Cys_rich_FGFR 446..503 CDD:425899 23/56 (41%)
Cys_rich_FGFR 117..175 CDD:425899 15/58 (26%)
Cys_rich_FGFR 178..237 CDD:425899 14/60 (23%)
Cys_rich_FGFR 252..308 CDD:425899 14/55 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.