Sequence 1: | NP_002325.2 | Gene: | LRP4 / 4038 | HGNCID: | 6696 | Length: | 1905 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524737.2 | Gene: | arr / 44279 | FlyBaseID: | FBgn0000119 | Length: | 1678 | Species: | Drosophila melanogaster |
Alignment Length: | 1276 | Identity: | 484/1276 - (37%) |
---|---|---|---|
Similarity: | 713/1276 - (55%) | Gaps: | 80/1276 - (6%) |
- Green bases have known domain annotations that are detailed below.
Human 442 LLFANRIDIRQVLPHR----SEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 502
Human 503 --------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAI 559
Human 560 ALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 622
Human 623 ERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDI 687
Human 688 HTLHPQRQPAGKNRCGDNNGGCTHLCL--PSGQNYTCACPTGFRKISSHACAQSLDKFLLFARRM 750
Human 751 DIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSL 815
Human 816 ESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWG- 879
Human 880 ASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGSQ 944
Human 945 LPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRRRPPVSTPCAME 1009
Human 1010 NGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTC-SPGMNSFLIFARRIDIRMVSLD-------- 1065
Human 1066 --IPYFADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDG 1128
Human 1129 LAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLE 1193
Human 1194 RSGMDGSDRAVLI--NNNLGWPNGLTVDKASSQLLWA-DAHTERIEAADLNGANRHTLV-SPVQH 1254
Human 1255 PYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRSNLPGLMDMQAVDRAQPLGFNKCGSRNGG 1319
Human 1320 CSHLCLPRPS--GFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVP 1382
Human 1383 ELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDT 1447
Human 1448 GRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINT 1512
Human 1513 DLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVS-HVSHPFALTQQDRWIYWTDWQT 1576
Human 1577 KSIQRVDKYSGRNKETVLANVEGLMDIIVV-SPQRQTGTN-ACGVNNGGCTHLC------FARAS 1633
Human 1634 DFVCACPDE----PDSRPCSLVPGLVPP----APRATGMSE 1666 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LRP4 | NP_002325.2 | LDLa | 27..66 | CDD:238060 | |
Ldl_recept_a | 70..105 | CDD:278486 | |||
LDLa | 110..142 | CDD:238060 | |||
LDLa | 148..182 | CDD:238060 | |||
LDLa | 231..265 | CDD:238060 | |||
LDLa | 270..304 | CDD:238060 | |||
LDLa | 311..343 | CDD:197566 | |||
FXa_inhibition | 358..393 | CDD:291342 | |||
EGF_CA | 395..434 | CDD:214542 | |||
NHL | <471..622 | CDD:302697 | 73/160 (46%) | ||
NHL repeat | 471..507 | CDD:271320 | 12/43 (28%) | ||
LDL-receptor class B 1 | 480..522 | 19/49 (39%) | |||
LY | 505..545 | CDD:214531 | 25/39 (64%) | ||
NHL repeat | 510..550 | CDD:271320 | 24/39 (62%) | ||
LDL-receptor class B 2 | 523..565 | 24/41 (59%) | |||
NHL repeat | 555..589 | CDD:271320 | 17/35 (49%) | ||
LDL-receptor class B 3 | 566..609 | 21/44 (48%) | |||
LY | 590..632 | CDD:214531 | 19/41 (46%) | ||
NHL repeat | 598..622 | CDD:271320 | 13/23 (57%) | ||
LDL-receptor class B 4 | 610..652 | 16/41 (39%) | |||
LY | 633..673 | CDD:214531 | 14/39 (36%) | ||
LDL-receptor class B 5 | 653..693 | 12/39 (31%) | |||
FXa_inhibition | 702..>729 | CDD:291342 | 16/28 (57%) | ||
LY | 766..806 | CDD:214531 | 19/39 (49%) | ||
LDL-receptor class B 6 | 785..827 | 21/41 (51%) | |||
LY | 808..850 | CDD:214531 | 20/41 (49%) | ||
LDL-receptor class B 7 | 828..870 | 24/41 (59%) | |||
LDL-receptor class B 8 | 871..914 | 23/43 (53%) | |||
Ldl_recept_b | 871..911 | CDD:278487 | 22/40 (55%) | ||
LY | 895..937 | CDD:214531 | 19/41 (46%) | ||
LDL-receptor class B 9 | 915..956 | 17/40 (43%) | |||
LY | 938..979 | CDD:214531 | 18/40 (45%) | ||
LDL-receptor class B 10 | 957..998 | 15/40 (38%) | |||
FXa_inhibition | 1006..1043 | CDD:291342 | 16/36 (44%) | ||
NHL | <1085..1277 | CDD:302697 | 77/195 (39%) | ||
NHL repeat | 1085..1123 | CDD:271320 | 13/37 (35%) | ||
LDL-receptor class B 11 | 1093..1135 | 17/41 (41%) | |||
NHL repeat | 1128..1161 | CDD:271320 | 16/32 (50%) | ||
LDL-receptor class B 12 | 1136..1178 | 19/41 (46%) | |||
NHL repeat | 1166..1203 | CDD:271320 | 15/36 (42%) | ||
LDL-receptor class B 13 | 1179..1222 | 16/44 (36%) | |||
Ldl_recept_b | 1179..1219 | CDD:278487 | 15/41 (37%) | ||
NHL repeat | 1212..1244 | CDD:271320 | 12/32 (38%) | ||
LDL-receptor class B 14 | 1223..1263 | 15/41 (37%) | |||
NHL repeat | 1253..1277 | CDD:271320 | 10/23 (43%) | ||
LDL-receptor class B 15 | 1264..1306 | 15/41 (37%) | |||
FXa_inhibition | 1313..1348 | CDD:291342 | 21/36 (58%) | ||
LY | 1379..1418 | CDD:214531 | 11/38 (29%) | ||
LDL-receptor class B 16 | 1397..1439 | 10/41 (24%) | |||
LY | 1420..1460 | CDD:214531 | 11/39 (28%) | ||
LDL-receptor class B 17 | 1440..1482 | 13/41 (32%) | |||
LDL-receptor class B 18 | 1483..1526 | 18/42 (43%) | |||
Ldl_recept_b | 1483..1523 | CDD:278487 | 16/39 (41%) | ||
LY | 1507..1547 | CDD:214531 | 13/39 (33%) | ||
LDL-receptor class B 19 | 1527..1568 | 15/41 (37%) | |||
LY | 1549..1589 | CDD:214531 | 11/40 (28%) | ||
LDL-receptor class B 20 | 1569..1610 | 11/41 (27%) | |||
FXa_inhibition | 1617..>1641 | CDD:291342 | 10/29 (34%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1659..1686 | 2/8 (25%) | |||
Endocytosis signal. /evidence=ECO:0000255 | 1766..1769 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1852..1905 | ||||
arr | NP_524737.2 | LY | 162..201 | CDD:214531 | 23/38 (61%) |
NHL | 168..503 | CDD:302697 | 149/336 (44%) | ||
NHL repeat | 172..237 | CDD:271320 | 35/64 (55%) | ||
LY | 252..293 | CDD:214531 | 19/40 (48%) | ||
NHL repeat | 261..298 | CDD:271320 | 17/36 (47%) | ||
NHL repeat | 303..339 | CDD:271320 | 15/36 (42%) | ||
NHL repeat | 341..419 | CDD:271320 | 29/77 (38%) | ||
NHL repeat | 428..476 | CDD:271320 | 22/47 (47%) | ||
LY | 472..511 | CDD:214531 | 20/38 (53%) | ||
NHL repeat | 477..503 | CDD:271320 | 15/25 (60%) | ||
Ldl_recept_b | 534..573 | CDD:278487 | 21/38 (55%) | ||
LY | 558..599 | CDD:214531 | 19/40 (48%) | ||
LY | 600..641 | CDD:214531 | 18/40 (45%) | ||
FXa_inhibition | 668..703 | CDD:291342 | 16/36 (44%) | ||
LY | 739..773 | CDD:214531 | 12/41 (29%) | ||
LY | 776..818 | CDD:214531 | 19/41 (46%) | ||
LY | 819..860 | CDD:214531 | 16/41 (39%) | ||
FXa_inhibition | 973..1010 | CDD:291342 | 21/36 (58%) | ||
LY | 1122..1164 | CDD:214531 | 18/41 (44%) | ||
FXa_inhibition | 1273..1313 | CDD:291342 | 12/40 (30%) | ||
LDLa | 1319..1362 | CDD:238060 | 4/17 (24%) | ||
LDLa | 1365..1399 | CDD:238060 | |||
LDLa | 1399..1433 | CDD:197566 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155341 | |
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6713 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D121310at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.650 |