Protein Alignment Hr78 and rxrab

DIOPT Version :9

• Sequence 1: NP_001189151.1
• Gene: Hr78 / 40378
• FlyBaseID: FBgn0015239
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: XP_009300230.1
• Gene: rxrab / 793011
• ZFINID: ZDB-GENE-990415-243
• Length: 494
• Species: Danio rerio
• Alignment Length: 602
• Identity: 134/602 - (22%)
• Similarity: 195/602 - (32%)
• Gaps: 274/602 - (45%)

  Fly    10 IKSEENRAMPLIGGGSASGGTPLPGGGVGMGAGASATLSVELCLVCGDRASGRHYGAISCEGCKG 74
            :.|.|:...||    ..:|...:|...:|.   .|.:|:..:|.:||||:||:|||..|||||||
Zfish   134 VSSSEDIKPPL----GLNGVMKVPAQPIGT---LSLSLTKHICAICGDRSSGKHYGVYSCEGCKG 191

  Fly    75 FFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAA 139
            ||||::||.|.|.||...:|.:.|..|||||:||.|||||.||:.::||.||:...:|.|
Zfish   192 FFKRTVRKDLTYTCRDNKDCMIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKERSE----- 251

  Fly   140 AGSSSTSGGGNGSSTYLSGKSGYQQGRGKGHSVKAESAATPPVHSAPATAFNLNENIFPMGLNFA 204
                :..||
Zfish   252 ----AEFGG-------------------------------------------------------- 256

  Fly   205 ELTQTLMFATQQQQQQQQQHQQSGSYSPDIPKADPEDDEDDSMDNSSTLCLQLLANSASNNNSQH 269
                                                             |    ||.
Zfish   257 -------------------------------------------------C----ANE-------- 260

  Fly   270 LNFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGNLSVKPECDSEAEDSGT 334
                                     ||           |::..||  ..|:|:|:         |
Zfish   261 -------------------------DM-----------PVEKILE--AELAVEPK---------T 278

  Fly   335 EDAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAFHVQPPTLVHSYLNIHYVCE 399
            |..|:|.|           :.|..|         ..|.:|:                     :|:
Zfish   279 ETYVEANL-----------SPSANS---------PNDPVTN---------------------ICQ 302

  Fly   400 TGSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAIALAQCQGQLSVPTIIGQFIQSTRQ 464
            ...:.:|..:...:::|.|..|....||.|||..|..|                :|..|  |.|.
Zfish   303 AADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNEL----------------LIASF--SHRS 349

  Fly   465 LADIDKI---EPLKISKMANLT--------RTLHDFVQELQSLDVTDMEFGLLRLILLFNP---- 514
            :|..|.|   ..|.:.:.:..|        |.|.:.|.:::.:.:...|.|.||.|:||||
Zfish   350 IAVKDGILLATGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKG 414

  Fly   515 -------TLLQQRKERSLRGYVRRVQLYALSSLRRQGGIGGGEERFNVLVARLLPLSSLDAEAME 572
                   ..|::|...||..|.:.       ....|.|      ||..|:.||..|.|:..:.:|
Zfish   415 LSNPSEVEALRERVYASLEAYCKH-------KYPDQPG------RFAKLLLRLPALRSIGLKCLE 466

  Fly   573 ELFFANLVGQMQMDALI 589
            .|||..|:|...:|..:
Zfish   467 HLFFFKLIGDTPIDTFL 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hr78	NP_001189151.1	NR_DBD_TR2_like	47..133	CDD:143525	48/85 (56%)
		NR_LBD_TR2_like	372..595	CDD:132750	55/240 (23%)
rxrab	XP_009300230.1	Nuc_recep-AF1	57..159	CDD:288658	6/28 (21%)
		NR_DBD_RXR	167..243	CDD:143514	45/75 (60%)
		NR_LBD_RXR_like	261..472	CDD:132741	68/304 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170577490
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.840