Sequence 1: | NP_001189151.1 | Gene: | Hr78 / 40378 | FlyBaseID: | FBgn0015239 | Length: | 601 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005161240.1 | Gene: | rxraa / 555578 | ZFINID: | ZDB-GENE-070314-2 | Length: | 500 | Species: | Danio rerio |
Alignment Length: | 600 | Identity: | 125/600 - (20%) |
---|---|---|---|
Similarity: | 198/600 - (33%) | Gaps: | 264/600 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 IKSEENRAMPLIGGG-----SASGGTPLPGGGVGMGAGASATLSVELCLVCGDRASGRHYGAISC 69
Fly 70 EGCKGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSDSVQHERKPIVDRKE 134
Fly 135 GIIAAAGSSSTSGGGNGSSTYLSGKSGYQQGRGKGHSVKAESAATPPVHSAPATAFNLNENIFPM 199
Fly 200 GLNFAELTQTLMFATQQQQQQQQQHQQSGSYSPDIPKADPEDDEDDSMDNSSTLCLQLLANSASN 264
Fly 265 NNSQHLNFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGNLSVKPECDSEA 329
Fly 330 EDSGTEDAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAFHVQPPTLVHSYLNI 394
Fly 395 HYVCETGSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAIALAQCQGQLSVPTIIGQFI 459
Fly 460 QSTRQLADIDKI---EPLKISKM--------ANLTRTLHDFVQELQSLDVTDMEFGLLRLILLFN 513
Fly 514 PT---LLQQRKERSLRGYV-RRVQLYALSSLRRQGGIGGGEERFNVLVARLLPLSSLDAEAMEEL 574
Fly 575 FFANLVGQMQMDALI 589 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hr78 | NP_001189151.1 | NR_DBD_TR2_like | 47..133 | CDD:143525 | 45/85 (53%) |
NR_LBD_TR2_like | 372..595 | CDD:132750 | 55/232 (24%) | ||
rxraa | XP_005161240.1 | Nuc_recep-AF1 | 63..159 | CDD:288658 | 5/24 (21%) |
NR_DBD_RXR | 166..247 | CDD:143514 | 46/167 (28%) | ||
NR_LBD_RXR_like | 267..478 | CDD:132741 | 63/297 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170577491 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |