DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr78 and Hr51

DIOPT Version :9

Sequence 1:NP_001189151.1 Gene:Hr78 / 40378 FlyBaseID:FBgn0015239 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_611032.2 Gene:Hr51 / 36702 FlyBaseID:FBgn0034012 Length:582 Species:Drosophila melanogaster


Alignment Length:613 Identity:139/613 - (22%)
Similarity:234/613 - (38%) Gaps:176/613 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SASGG---TPLPGGGVGMGAGASATLSVELCLVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGY 86
            ||:.|   |.:.|..:|:           :|:||||.:||:|||.::|.||.||||||:|::|.|
  Fly    92 SAAEGSSMTRIKGQNLGL-----------ICVVCGDTSSGKHYGILACNGCSGFFKRSVRRKLIY 145

  Fly    87 QCR-GAMNCEVTKHHRNRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAAAGSSSTSGGGN 150
            :|: |...|.|.|.|||:||.|||:|||..||..|:||:||:|                    .|
  Fly   146 RCQAGTGRCVVDKAHRNQCQACRLKKCLQMGMNKDAVQNERQP--------------------RN 190

  Fly   151 GSSTYLSGKSGYQQGRGKGHSVKAESAATPPV-HSAPATAFNL----NENIFPMG--LNFAELTQ 208
            .::.........:.||....:..|.....||| .|.|.....|    :....|.|  |:...||.
  Fly   191 TATIRPETLREMEHGRALREAAVAVGVFGPPVLLSPPCYGSGLLPPPSLGSLPTGRLLHHNHLTS 255

  Fly   209 TLMFATQQQQQQQQQHQQSGSY----------SPDIPKADPEDDEDDSMDNSSTLCLQLLANSAS 263
            ::..|.        .|..:||:          ||.......|.....::.:|:        ||:|
  Fly   256 SMQLAA--------NHMGAGSFPMFNAAGVHHSPKEKAYGMEMATSGNVSHST--------NSSS 304

  Fly   264 NN----------NSQHLNFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGN 318
            |:          |::.:|...|.|.:...::.||                               
  Fly   305 NHSIDPSSPAPENAKEINIAGGSVSSVSSSSPTM------------------------------- 338

  Fly   319 LSVKPECDSEAEDSGTEDAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAF--- 380
                       |:...:|::|...::.|                 ..||...|      .:|   
  Fly   339 -----------ENDNDDDSIDVTNDNEE-----------------PHAVSRSD------SSFIMP 369

  Fly   381 -HVQPPTLVHSYLNIHYVCETGSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAI-ALA 443
             .:.|....|.:..::   ||.:|::|:.:...:.:|.|.:|....||.||...|..|..: |:.
  Fly   370 QFMSPNLYTHQHETVY---ETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQ 431

  Fly   444 QCQGQLSVPT--------IIGQFIQSTRQLADIDKIEPLKISKMANLTRTLHDFVQELQSLDVTD 500
            .|     :|.        .:.:...:....|:.|..  :...::|...||||:...:.:::.|..
  Fly   432 WC-----IPLDPTGCALFSVAEHCNNLENNANGDTC--ITKEELAADVRTLHEIFCKYKAVLVDP 489

  Fly   501 MEFGLLRLILLFNPTLLQQRKERSLRGYVR----RVQLYALSSLRRQGGIGGGEERFNVLVARLL 561
            .||..|:.|:||.|      :.|.|:...:    :.|.:.:.|...:........||..|:..|.
  Fly   490 AEFACLKAIVLFRP------ETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLP 548

  Fly   562 PLSSLDAEAMEELFFANLVGQMQMDALI 589
            .|..:.:..:|.::|...:|...|:.::
  Fly   549 LLRMISSHKIESIYFQRTIGNTPMEKVL 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr78NP_001189151.1 NR_DBD_TR2_like 47..133 CDD:143525 46/86 (53%)
NR_LBD_TR2_like 372..595 CDD:132750 47/235 (20%)
Hr51NP_611032.2 NR_DBD_PNR 103..194 CDD:143528 49/121 (40%)
NR_LBD_Tlx_PNR_like 354..569 CDD:132748 49/253 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444774
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24083
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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