DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr78 and nr2f5

DIOPT Version :9

Sequence 1:NP_001189151.1 Gene:Hr78 / 40378 FlyBaseID:FBgn0015239 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_571261.1 Gene:nr2f5 / 30427 ZFINID:ZDB-GENE-990415-253 Length:403 Species:Danio rerio


Alignment Length:605 Identity:132/605 - (21%)
Similarity:200/605 - (33%) Gaps:268/605 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SASGGTPL------PGGGVGMGAGASA---TLSVEL-----CLVCGDRASGRHYGAISCEGCKGF 75
            ||..|:.|      |||..|..:|::.   .||.:.     |:||||::||:|||..:|||||.|
Zfish    13 SADPGSQLQMCSQEPGGTPGTPSGSTPGNDALSGDKIPNVDCMVCGDKSSGKHYGQFTCEGCKSF 77

  Fly    76 FKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGIIAAA 140
            ||||:|:.|.|.|||..:|.:.:||||:||:|||:|||..|||.::||..|........|...:.
Zfish    78 FKRSVRRNLSYTCRGNRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMSNSQSSPGQYLSN 142

  Fly   141 GSSSTSGGGNGSSTYLSGKSGYQQGRGKGHSVKAESAATPPVHSAPATAFNLNENIFPMGLNFAE 205
            ||...:|     ..||||                                      |...|..||
Zfish   143 GSDPYNG-----QPYLSG--------------------------------------FISLLLRAE 164

  Fly   206 LTQTLMFATQQQQQQQQQHQQSGSYSPDIPKADPEDDEDDSMDNSSTLCLQLLANSASNNNSQHL 270
            ...|..:..|                                      |:|      |||     
Zfish   165 PYPTSRYGAQ--------------------------------------CMQ------SNN----- 180

  Fly   271 NFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGNLSVKPECDSEAEDSGTE 335
                                               |..|:|                        
Zfish   181 -----------------------------------LMGIEN------------------------ 186

  Fly   336 DAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAFHVQPPTLVHSYLNIHYVCET 400
                                                                         :||.
Zfish   187 -------------------------------------------------------------ICEL 190

  Fly   401 GSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAIALAQCQGQLSVPTIIGQF------I 459
            .:|::|..:...:.:|.|..|:...||.|||..|..|..:..|||...|.|..::...      :
Zfish   191 AARLLFSAVEWAKNIPFFPDLQLMDQVALLRMSWSELFVLNAAQCSMPLHVAPLLAAAGLHASPM 255

  Fly   460 QSTRQLADIDKIEPLKISKMANLTRTLHDFVQELQSLDVTDMEFGLLRLILLFNPTL-------- 516
            .:.|.:|.:|.|            |...:.|::|::|.|...|:..|:.|:||....        
Zfish   256 SAERVVAFMDHI------------RVFQEQVEKLKALQVDTAEYSCLKSIVLFTSDAMGLSDVAH 308

  Fly   517 ---LQQRKERSLRGYVRRVQLYALSSLRRQGGIGGGEERFNVLVARLLPLSSLDAEAMEELFFAN 578
               :|::.:.:|..|||       :....|      ..||..|:.||..|..:.:..:|:|||..
Zfish   309 VESIQEKSQCALEEYVR-------NQYPNQ------PNRFGRLLLRLPSLRIVSSPVIEQLFFVR 360

  Fly   579 LVGQMQMDALIPFILMTSNT 598
            |||:..::.|:..:|::.::
Zfish   361 LVGKTPIETLLRDMLLSGSS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr78NP_001189151.1 NR_DBD_TR2_like 47..133 CDD:143525 47/90 (52%)
NR_LBD_TR2_like 372..595 CDD:132750 54/239 (23%)
nr2f5NP_571261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..44 7/27 (26%)
NR_DBD_COUP_TF 54..126 CDD:143516 43/71 (61%)
NR_LBD_COUP-TF 152..387 CDD:132746 72/461 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577468
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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