DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hr78 and NR2F6

DIOPT Version :9

Sequence 1:NP_001189151.1 Gene:Hr78 / 40378 FlyBaseID:FBgn0015239 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_005225.2 Gene:NR2F6 / 2063 HGNCID:7977 Length:404 Species:Homo sapiens


Alignment Length:608 Identity:138/608 - (22%)
Similarity:206/608 - (33%) Gaps:261/608 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SEENRAMPLIGGGSASGGTP----LPGGGVGMGAGASATLSVELCLVCGDRASGRHYGAISCEGC 72
            :|::.|.|   .|:||...|    .||            |.|: |:||||::||:|||..:||||
Human    28 AEDDSASP---PGAASDAEPGDEERPG------------LQVD-CVVCGDKSSGKHYGVFTCEGC 76

  Fly    73 KGFFKRSIRKQLGYQCRGAMNCEVTKHHRNRCQFCRLQKCLASGMRSDSVQHERKPIVDRKEGII 137
            |.|||||||:.|.|.||...:|::.:||||:||:|||:||...|||.::||..|.|     ..:.
Human    77 KSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRIP-----HSLP 136

  Fly   138 AAAGSSSTSGGGNGSSTYLSGKSGYQQGRGKGHSVKAESAATPPVHSAPATAFNLNENIFPMGLN 202
            .|..:||.|..|:..:...||                                   .::|| |..
Human   137 GAVAASSGSPPGSALAAVASG-----------------------------------GDLFP-GQP 165

  Fly   203 FAELTQTLMFATQQQQQQQQQHQQSGSYSPDIPKADPEDDEDDSMDNSSTLCLQLLANSASNNNS 267
            .:||...|:                        :|:|                            
Human   166 VSELIAQLL------------------------RAEP---------------------------- 178

  Fly   268 QHLNFNAGEVPTALPTTSTMGLIQSSLDMRVIHKGLQILQPIQNQLERNGNLSVKPECDSEAEDS 332
                     .|.|                                                   :
Human   179 ---------YPAA---------------------------------------------------A 183

  Fly   333 GTEDAVDAELEHMELDFECGGNRSGGSDFAINEAVFEQDLLTDVQCAFHVQPPTLVHSYLNIHYV 397
            |.              |..||..:|                                :.|.|..|
Human   184 GR--------------FGAGGGAAG--------------------------------AVLGIDNV 202

  Fly   398 CETGSRIIFLTIHTLRKVPVFEQLEAHTQVKLLRGVWPALMAIALAQCQGQLSVPTIIGQF---- 458
            ||..:|::|.|:...|..|.|.:|....||.|||..|..|..:..||....|....::...    
Human   203 CELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHA 267

  Fly   459 --IQSTRQLADIDKIEPLKISKMANLTRTLHDFVQELQSLDVTDMEFGLLRLILLFNPTL----- 516
              :.:.|.:|.:|::            |...:.|.:|..|.|...|:|.|:.|.||.|..     
Human   268 APMAAERAVAFMDQV------------RAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSD 320

  Fly   517 ------LQQRKERSLRGYVRRVQLYALSSLRRQGGIGGGEERFNVLVARLLPLSSLDAEAMEELF 575
                  ||::.:.:|..|||             .......:||..|:.||..|.::.|..:.:||
Human   321 PAHVESLQEKAQVALTEYVR-------------AQYPSQPQRFGRLLLRLPALRAVPASLISQLF 372

  Fly   576 FANLVGQMQMDALIPFILMTSNT 598
            |..|||:..::.||..:|::.:|
Human   373 FMRLVGKTPIETLIRDMLLSGST 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hr78NP_001189151.1 NR_DBD_TR2_like 47..133 CDD:143525 47/85 (55%)
NR_LBD_TR2_like 372..595 CDD:132750 59/239 (25%)
NR2F6NP_005225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 7/23 (30%)
NR_DBD_COUP_TF 56..128 CDD:143516 42/71 (59%)
NR_LBD_COUP-TF 165..400 CDD:132746 72/414 (17%)
Important for dimerization. /evidence=ECO:0000250 327..404 23/82 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144378
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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