DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and PZF1

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_015512.1 Gene:PZF1 / 856316 SGDID:S000006390 Length:429 Species:Saccharomyces cerevisiae


Alignment Length:292 Identity:89/292 - (30%)
Similarity:114/292 - (39%) Gaps:72/292 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRS-HTGERPFTCSLCPKSFGYSSGLQ 163
            |.|.|....||...          |.|:|...|.|..|..| |.|.|.|.|..|.|||...|.|:
Yeast    42 SSNRPKTYFCDYDG----------CDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLE 96

  Fly   164 NHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPY--CQKCFLTSLILKQH-LATH 225
            .|:.||:..:|||||:|.:..|....||.|...|.:  |..||.  |...|.....|:.| |:.|
Yeast    97 RHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTK--SFICPEEGCNLRFYKHPQLRAHILSVH 159

  Fly   226 TDETQFKCSQCSKSFQVEHELWMHMRVHQ----ERLFTC--GHCSKDFALHAYLKRHLSRNARCS 284
            ..  :..|..|:||||..:.|..|:..|.    |..:.|  ..|.|:|.:.:.|:.|:..:    
Yeast   160 LH--KLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKND---- 218

  Fly   285 QSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSH-----TKNKPLLEGPCKSSGSKPAHS 344
                        |.| |||..|.|.....:.|..|:..|     |||                  
Yeast   219 ------------HPK-LKCPICSKPCVGENGLQMHMIIHDDSLVTKN------------------ 252

  Fly   345 NAQRKPFKCSSCP-RTFSRKSALLTHL-QTHT 374
                  :||..|| .:||||..||||. ..||
Yeast   253 ------WKCHICPDMSFSRKHDLLTHYGSIHT 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 45/125 (36%)
C2H2 Zn finger 121..141 CDD:275368 7/20 (35%)
zf-H2C2_2 133..158 CDD:290200 12/25 (48%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 10/22 (45%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 7/22 (32%)
zf-C2H2_8 206..286 CDD:292531 23/88 (26%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 6/38 (16%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 11/21 (52%)
PZF1NP_015512.1 COG5048 46..427 CDD:227381 87/288 (30%)
C2H2 Zn finger 54..74 CDD:275368 7/29 (24%)
C2H2 Zn finger 82..102 CDD:275368 8/19 (42%)
C2H2 Zn finger 110..130 CDD:275368 7/19 (37%)
C2H2 Zn finger 136..155 CDD:275368 5/18 (28%)
C2H2 Zn finger 165..185 CDD:275368 8/19 (42%)
C2H2 Zn finger 196..216 CDD:275368 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
C2H2 Zn finger 255..277 CDD:275368 11/21 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 121 1.000 Inparanoid score I1302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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