DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and si:cabz01071909.2

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_688630.2 Gene:si:cabz01071909.2 / 560148 ZFINID:ZDB-GENE-161017-114 Length:316 Species:Danio rerio


Alignment Length:333 Identity:96/333 - (28%)
Similarity:138/333 - (41%) Gaps:75/333 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDI--NECD---------------------I 111
            :||.|:      :|:   |..|::..:|.|:..:|.:  .|.|                     |
Zfish     7 KEEGED------KEI---EESLREKHEDTDTQTDPMVLKEESDVPKETEENDRHLKTLNDVHIVI 62

  Fly   112 KAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQ 176
            ..:|.| |.|..|...|..|.:|..|:|.||||:|:||..|.|||.....|:.||..|:.|:|:.
Zfish    63 HTEESP-FICQQCGAKFTQKGSLNRHLRVHTGEKPYTCPECGKSFAQHGNLEVHMGVHSEEKPYS 126

  Fly   177 CSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQ 241
            |..|.:||....:|.:|:::|.......|..|...|.....|.:||..||.|..|.|..|.|||.
Zfish   127 CQQCGKSFNRKGNLNSHMRIHSGESVFTCQQCGLTFTLRESLSRHLRIHTGERPFSCQHCGKSFD 191

  Fly   242 VEHELWMHMRVHQERL-FTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHS--KALKC 303
            .:..|..|||.|.... ::|..|.|.|....:.|.|:..                 ||  |...|
Zfish   192 QQENLQAHMRNHTGATPYSCPQCKKSFRQKGHFKDHMRI-----------------HSGDKLYTC 239

  Fly   304 GKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQRKPFKCSSCPRTFSRKSALLT 368
            .:|.:.|:.|.....|::.||                      ..|||.|..|.|:|:|:..|..
Zfish   240 PQCERVFSQRGHFEDHIRIHT----------------------GEKPFMCPHCGRSFNRRGILNR 282

  Fly   369 HLQTHTGK 376
            |::||||:
Zfish   283 HVRTHTGE 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 46/121 (38%)
C2H2 Zn finger 121..141 CDD:275368 7/19 (37%)
zf-H2C2_2 133..158 CDD:290200 14/24 (58%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:292531 25/80 (31%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 6/36 (17%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
si:cabz01071909.2XP_688630.2 COG5048 <18..227 CDD:227381 66/209 (32%)
C2H2 Zn finger 71..91 CDD:275368 7/19 (37%)
zf-H2C2_2 83..108 CDD:290200 14/24 (58%)
C2H2 Zn finger 99..119 CDD:275368 8/19 (42%)
zf-H2C2_2 111..136 CDD:290200 10/24 (42%)
C2H2 Zn finger 127..147 CDD:275368 6/19 (32%)
C2H2 Zn finger 155..175 CDD:275368 6/19 (32%)
zf-H2C2_2 167..192 CDD:290200 12/24 (50%)
C2H2 Zn finger 183..203 CDD:275368 9/19 (47%)
zf-H2C2_2 195..220 CDD:290200 9/24 (38%)
C2H2 Zn finger 211..231 CDD:275368 6/36 (17%)
COG5048 234..>305 CDD:227381 22/79 (28%)
C2H2 Zn finger 239..259 CDD:275368 5/19 (26%)
zf-H2C2_2 251..276 CDD:290200 10/46 (22%)
C2H2 Zn finger 267..287 CDD:275368 7/19 (37%)
zf-H2C2_2 280..304 CDD:290200 6/11 (55%)
C2H2 Zn finger 295..315 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.