DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and znf973

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001104625.1 Gene:znf973 / 557295 ZFINID:ZDB-GENE-080218-9 Length:345 Species:Danio rerio


Alignment Length:354 Identity:117/354 - (33%)
Similarity:172/354 - (48%) Gaps:52/354 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EDAQNAFDIIETYERSHQFYRFLKDVREEESENDG---------SGCSE--EVEAAERDLQDGAD 96
            ||.|...|:||..|.|.:....:|...:...:.||         ..|::  ::.|::..|:    
Zfish    22 EDLQEQTDLIEEKEGSKEEEHHVKIEEKTHLQTDGILKRRDKNSFTCTQCGKILASKSKLK---- 82

  Fly    97 DVDSGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSG 161
                      ....|...||| |:|:.|.|||.:.|:|.:|||.||||:|:||:.|.|||.:.|.
Zfish    83 ----------IHMSIHTGEKP-FTCTQCGKSFSLSSSLNLHMRIHTGEKPYTCTQCGKSFSHLSP 136

  Fly   162 LQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHT 226
            |..|||.||||:||.|:.|.:||:....|..|:::|.......|..|.|.|..|..|.:|:..||
Zfish   137 LNKHMRIHTGEKPFTCTQCGKSFSLSTSLNLHMRIHTGEKPFTCTRCGKSFNCSSNLSKHMMIHT 201

  Fly   227 DETQFKCSQCSKSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKAS 290
            .:..|.|:||.|||::...|.:|||:|. |:.|||..|...|                ||||..:
Zfish   202 GKKPFTCTQCEKSFRISSSLNLHMRIHTGEKPFTCTQCGNSF----------------SQSSSLN 250

  Fly   291 AHKTLGHS--KALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQ------ 347
            .|..: |:  |...|.:|.|:|.....|:.|::.||..||.....|:.|.:..:|.|..      
Zfish   251 KHMRI-HTGEKPFTCTQCVKSFNRSEHLNLHMRIHTGEKPFTCTECEKSFTCSSHLNRHMRKHTG 314

  Fly   348 RKPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            .||:.|:.|.:.||:.|.|..|:.:|.|:
Zfish   315 EKPYACTQCGKIFSQSSRLNLHMVSHNGE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 8/19 (42%)
COG5048 <119..241 CDD:227381 55/121 (45%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..156 CDD:463886 13/22 (59%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
zf-H2C2_2 162..185 CDD:463886 13/22 (59%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
zf-C2H2_8 206..286 CDD:464935 27/80 (34%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
znf973NP_001104625.1 C2H2 Zn finger 68..88 CDD:275368 3/33 (9%)
C2H2 Zn finger 96..116 CDD:275368 10/19 (53%)
COG5048 120..>337 CDD:227381 81/233 (35%)
C2H2 Zn finger 124..144 CDD:275368 10/19 (53%)
C2H2 Zn finger 152..172 CDD:275368 6/19 (32%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
C2H2 Zn finger 208..228 CDD:275368 10/19 (53%)
C2H2 Zn finger 236..256 CDD:275368 8/36 (22%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
zf-H2C2_2 276..301 CDD:463886 8/24 (33%)
C2H2 Zn finger 292..312 CDD:275368 4/19 (21%)
zf-H2C2_2 304..329 CDD:463886 7/24 (29%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)

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