DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and zgc:113295

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_021326232.1 Gene:zgc:113295 / 541420 ZFINID:ZDB-GENE-050320-122 Length:366 Species:Danio rerio


Alignment Length:365 Identity:118/365 - (32%)
Similarity:163/365 - (44%) Gaps:64/365 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LKDVREEESEN--DGSGCSEEVEAAERDLQDGADDVDSGNEPDINEC---DIKAKEKPGFSCSHC 124
            :||...|||.:  ||:|.:||           .:||.:|....:..|   .:|..:|..|:|:.|
Zfish     9 IKDEDTEESVDPIDGNGETEE-----------GNDVKAGKIAPLKTCGVFTVKNGDKNPFTCTRC 62

  Fly   125 PKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHH 189
            .:....|.:|::|||.||||.||||:.|.:.|...|.|..||..||||:|:.|:||.|.|.....
Zfish    63 AQILGNKKSLEIHMRIHTGEIPFTCTRCGRGFYQLSNLNKHMTIHTGEKPYTCTHCGRGFYQPSL 127

  Fly   190 LKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQ 254
            |..|:::|.......|..|.|.|..:..||||:..||.|..|.|:||..||.....|..|||:|.
Zfish   128 LNRHMRVHTGEKPFTCTQCGKSFNQATQLKQHMMNHTGEKPFTCTQCGTSFTQSSALNKHMRIHT 192

  Fly   255 -ERLFTCGHCSKDFALHAYLKRHL-----SRNARCSQSSKA-------SAHKTLGHSK------- 299
             |:.:||..|...|...:.|.||:     .:..:|...||.       ..|..:..|:       
Zfish   193 GEKPYTCTQCGTSFGASSSLSRHMLIHTGEKTHKCDHCSKTFLSASHLKVHLAVHRSEKPYSCPV 257

  Fly   300 -----ALK-----------------CGKCPKTFTDRSALSTHLKSHTKNKPLLEGPC----KSSG 338
                 .||                 |.||.|||...:.|..|.:.||..||.....|    :.||
Zfish   258 CEKSFTLKCILKRHQKIHTGVREHLCFKCVKTFMSAAELKQHERIHTGEKPFKCSHCDKRFRQSG 322

  Fly   339 SKPAHS--NAQRKPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            |...|.  :...||:|||.|.:.||:..:|..|.:.|||:
Zfish   323 SLKTHERIHTGEKPYKCSHCDKRFSQSESLKRHERIHTGE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 51/121 (42%)
C2H2 Zn finger 121..141 CDD:275368 7/19 (37%)
zf-H2C2_2 133..158 CDD:290200 14/24 (58%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
zf-C2H2_8 206..286 CDD:292531 30/85 (35%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 10/48 (21%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
zgc:113295XP_021326232.1 C2H2 Zn finger 59..79 CDD:275368 7/19 (37%)
COG5048 <71..355 CDD:227381 94/283 (33%)
C2H2 Zn finger 87..107 CDD:275368 7/19 (37%)
C2H2 Zn finger 115..135 CDD:275368 7/19 (37%)
C2H2 Zn finger 143..163 CDD:275368 8/19 (42%)
C2H2 Zn finger 171..191 CDD:275368 9/19 (47%)
C2H2 Zn finger 199..219 CDD:275368 6/19 (32%)
C2H2 Zn finger 227..247 CDD:275368 4/19 (21%)
C2H2 Zn finger 255..275 CDD:275368 2/19 (11%)
C2H2 Zn finger 283..303 CDD:275368 8/19 (42%)
C2H2 Zn finger 311..331 CDD:275368 5/19 (26%)
C2H2 Zn finger 339..359 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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