DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG3281

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:541 Identity:113/541 - (20%)
Similarity:172/541 - (31%) Gaps:217/541 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ESHEPGL----SIAYIIYKCTGWQ----VEK-----HDP-LSNTICKSCLEDAQNAFDIIETYER 57
            |:||..|    .|.|...|...||    |.|     .|| |...:|::|......|::.|...|.
  Fly    20 ETHETNLYVHDEIKYNDLKLELWQLLEAVSKLKWTWTDPNLPMHLCQNCARRLIGAYEFIVEVEN 84

  Fly    58 SHQFYRFLKDVREEESEND-----------------------GSGCSEEVEAAER--DLQDGADD 97
            :|:..:.|.:.:|..::.|                       .|...:.||..|:  |....|..
  Fly    85 AHETLQNLFEQQEVAAKPDEVHVDVVELIDQDDVVSMAQYLSTSFAEQHVEMEEKYGDQDCSAFT 149

  Fly    98 VDSGNEP--------DINECDIKAKEKPG------------------------------------ 118
            .|.|.||        |..|...:.|.:|.                                    
  Fly   150 SDVGEEPLYASEDRDDEPEDSFQLKPRPDEIENRELSRPSQLGSRLNHSANFIYKCAVCPRVFAK 214

  Fly   119 --------------------------------FSCSHCPKSFQVK-------------------- 131
                                            .:|.|||::|:.:                    
  Fly   215 SESLTRHFSQAHKLTADVAAMKLANESCGTGLLTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPE 279

  Fly   132 --------------------------SNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHT 170
                                      |:|.:|:|.|||:.|:.|..|.|:|..|..|..|||.||
  Fly   280 ETTDNSARKRIAKRRDCPHCGLSFPVSSLTIHIRRHTGDNPYKCDQCEKAFPRSQDLSLHMRQHT 344

  Fly   171 GERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQ 235
            ||||.:|..|.:.|.:.:.|..|:::|..:....|..|.|.|:.|..||.|:..||.|..::|..
  Fly   345 GERPSECKICSKKFISQNKLARHMRLHTGQRPYSCKMCSKSFVQSNDLKIHMRRHTGERPYQCGV 409

  Fly   236 CSKSFQVEHELWMHMRVHQERLFTCGH---------CSKDFALHAYLKRHLSRNARCSQSSKASA 291
            |.:||    ....|:.:|:.|.   ||         ...:||...|:      |||.:|......
  Fly   410 CGESF----VCGSHLNIHRNRK---GHLIAVIPGNEVEANFAADPYV------NARVNQRRSEDI 461

  Fly   292 HKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQRKPFKCSSC 356
            .:       ::..:.|:         ..|:...:|.|..:.|...              :||..|
  Fly   462 ER-------MRLQRIPE---------NQLQQRLENLPKPDVPAMC--------------YKCGVC 496

  Fly   357 PRTFSRKSALLTHLQTHTGKL 377
            .:.| :..||||   .|..|:
  Fly   497 EQKF-KSGALLT---VHRNKM 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 20/69 (29%)
COG5048 <119..241 CDD:227381 48/167 (29%)
C2H2 Zn finger 121..141 CDD:275368 9/65 (14%)
zf-H2C2_2 133..158 CDD:290200 11/24 (46%)
C2H2 Zn finger 149..169 CDD:275368 9/19 (47%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
zf-C2H2_8 206..286 CDD:292531 25/88 (28%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..297 CDD:275368 9/45 (20%)
C2H2 Zn finger 303..323 CDD:275368 2/19 (11%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
CG3281NP_650132.1 zf-AD 14..92 CDD:285071 20/71 (28%)
C2H2 Zn finger 205..226 CDD:275368 0/20 (0%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 34/96 (35%)
C2H2 Zn finger 296..315 CDD:275368 4/18 (22%)
zf-H2C2_2 307..330 CDD:290200 10/22 (45%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..358 CDD:290200 12/22 (55%)
C2H2 Zn finger 351..371 CDD:275368 5/19 (26%)
zf-H2C2_2 364..388 CDD:290200 7/23 (30%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
zf-H2C2_2 391..416 CDD:290200 10/28 (36%)
C2H2 Zn finger 407..424 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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