DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG6791

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_650090.1 Gene:CG6791 / 41391 FlyBaseID:FBgn0037918 Length:1243 Species:Drosophila melanogaster


Alignment Length:494 Identity:95/494 - (19%)
Similarity:150/494 - (30%) Gaps:195/494 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CKSCLEDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGN 102
            ||.|.:...:..:||....:.|.....:.:..|||   ||     :..:|..|..||.:....||
  Fly   425 CKLCYKGYTDHQEIIRHLLQQHHMDTLMSEDAEEE---DG-----DAPSAIEDECDGDNGNGEGN 481

  Fly   103 EPDINECDIKAKEKP----------------GFSCSHCPKSFQVKSNLKVH-MRSHT-------- 142
            ...::|.....::.|                .:.|..|.|.|..|.:.:.| :.:|:        
  Fly   482 GAPLDEDSPYFEDAPRRGGRISSDDIFEPHIDYLCPQCGKEFIEKKHWRTHVVMAHSMNDLSKLN 546

  Fly   143 ----GERPFTCSLCPKSFGYSSGLQN---HMRTHTGERPF----QCSHCPRSFTAGHHLKAHIQM 196
                .||...|:.|.|....:.|:||   |..||.   ||    :|..|.:|:|....|..|:..
  Fly   547 FEMINERQLKCTECDKIITNAYGIQNAQQHRITHL---PFKAYARCRKCHKSYTDRKGLVKHLAT 608

  Fly   197 HERRGSLR-----CPYCQKCFLTSLIL------KQHLATHTDET--------------------- 229
            |.|.|..|     ||        :.||      ::.:.|..:||                     
  Fly   609 HHRVGWPRKLSGGCP--------APILTPAKQPRKQIVTVANETYEIIYLDDVDQGGMEEDNDFG 665

  Fly   230 --------------------------------QFKCSQCSKSFQVEHELWMHM------------ 250
                                            ::||..|...|..:..:.:|:            
  Fly   666 EQMQAEEDEYPIAPPPPSPPPPPQPTTQGNHQRYKCVHCGTLFATQAAVRVHISEKRCRKTVVRR 730

  Fly   251 --------------RVHQERLFTCGHCSKDFALHAYLKRHLSR----------NAR--------C 283
                          .|.|..:|.|..|..::......:||::.          |.|        |
  Fly   731 RRQPVMSSADPSVPTVEQNYIFLCPSCGFEYKTQFEWRRHINEVHNFDKRQYLNMRQLDKYRYQC 795

  Fly   284 SQ------SSKASA-----HKTLGHSKALKCGKCPKTFTDRSALSTHLKSH------------TK 325
            :|      :||...     .:.|.:...|||..|...:..:..::.||::.            ||
  Fly   796 TQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRARHSIFDRETPTMITK 860

  Fly   326 NKPLL--------EGP-CKSSGSKPAHSNAQRKPFKCSS 355
            .|.:|        |.| ..|....||.:.|...|..|||
  Fly   861 PKQVLGRYKDNSRENPKLPSPPPAPALAPAPPSPPACSS 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 6/24 (25%)
COG5048 <119..241 CDD:227381 40/205 (20%)
C2H2 Zn finger 121..141 CDD:275368 6/20 (30%)
zf-H2C2_2 133..156 CDD:463886 7/35 (20%)
C2H2 Zn finger 149..169 CDD:275368 7/22 (32%)
zf-H2C2_2 162..185 CDD:463886 10/29 (34%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 4/25 (16%)
zf-C2H2_8 206..286 CDD:464935 22/188 (12%)
C2H2 Zn finger 233..253 CDD:275368 4/45 (9%)
C2H2 Zn finger 260..297 CDD:275368 11/65 (17%)
C2H2 Zn finger 303..323 CDD:275368 4/19 (21%)
C2H2 Zn finger 353..373 CDD:275368 3/3 (100%)
CG6791NP_650090.1 C2H2 Zn finger 167..188 CDD:275368
C2H2 Zn finger 208..230 CDD:275368
C2H2 Zn finger 235..256 CDD:275368
C2H2 Zn finger 516..532 CDD:275368 5/15 (33%)
C2H2 Zn finger 557..580 CDD:275368 7/22 (32%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
COG5236 <939..>1096 CDD:227561
Blue background indicates that the domain is not in the aligned region.

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