DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and kipf

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_649750.1 Gene:kipf / 40937 FlyBaseID:FBgn0014931 Length:434 Species:Drosophila melanogaster


Alignment Length:395 Identity:97/395 - (24%)
Similarity:146/395 - (36%) Gaps:127/395 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EPGLSIAYIIYKCTGWQVEKHDPLSNTICKSCLEDAQNAFDIIETYERSHQ-FYRFLKDVREEES 73
            ||.:|:::|:.:||...|::.|.|...||.||:...||||......|:|:| |:|.|......|:
  Fly    33 EPEMSLSHILARCTERPVKRGDLLPQFICVSCVLAVQNAFRFKWQSEQSYQHFFRVLNQSGAPEN 97

  Fly    74 ENDGSGCS----------------------------------EEVEAAERDLQDGADDVDSGNE- 103
            :...:.|:                                  .:.:..:..||:|  ::|...| 
  Fly    98 QVHLAACNGDKNQIINQKMQLKSDRQQDTQQMTKTQKPDDDLSQKQTLQAKLQEG--NIDGPPES 160

  Fly   104 ----PDINEC------DIKAKE----------KPGF-------------------------SCSH 123
                |....|      |:..||          ..|:                         .|.:
  Fly   161 FTLHPRKRTCRTEEQADMIPKEATRSTKMICDADGYYNCPHCSKRFCSQTQLRTHITDLCNRCPY 225

  Fly   124 CPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGH 188
            ||:::..|||||.|:|:|..:....|..|.|:|.....|:.|:|||..:.|..||.|...|....
  Fly   226 CPRTYMQKSNLKRHLRNHLSKPAHKCFHCSKAFMRKDHLKRHLRTHDSDGPLSCSQCSAVFIEHV 290

  Fly   189 HLKAHIQMHERR-GSLR------------------------------------------CPYCQK 210
            .|:.|.:.|::| ||.:                                          |..|||
  Fly   291 QLEIHRREHKQRPGSSKSESTKDPDSDDSDQAQDLKPKWTKNTFNGTCSIPPMLKPKPICDICQK 355

  Fly   211 CFLTSLILKQHLATHTDETQF-KCSQCSKSFQVEHELWMHMRVHQERLFTCGHCSKDFALHAYLK 274
            .|.:...||:|:.||..:... ||:.||:.|:.|..|..|.|.|...||.|..||..|....||:
  Fly   356 KFSSVYALKRHMLTHNRQHHLKKCTYCSEEFKTEKHLKRHERGHMGDLFRCEFCSLVFVDVNYLR 420

  Fly   275 RHLSR 279
            :|..|
  Fly   421 KHKKR 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 21/53 (40%)
COG5048 <119..241 CDD:227381 45/190 (24%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..156 CDD:463886 9/22 (41%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:463886 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
zf-C2H2_8 206..286 CDD:464935 29/75 (39%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 8/20 (40%)
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
kipfNP_649750.1 zf-AD 8..75 CDD:462262 17/41 (41%)
COG5048 220..>284 CDD:227381 24/63 (38%)
C2H2 Zn finger 223..243 CDD:275368 10/19 (53%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 350..370 CDD:275368 8/19 (42%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
C2H2 Zn finger 406..427 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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