DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and CG10654

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001261767.1 Gene:CG10654 / 39428 FlyBaseID:FBgn0036294 Length:412 Species:Drosophila melanogaster


Alignment Length:379 Identity:93/379 - (24%)
Similarity:144/379 - (37%) Gaps:85/379 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DESH----EPGLSIAYIIYKCTGWQVEKHDP---LSNTICKSCLEDAQNAFDIIETYERS-HQFY 62
            |..|    |..|:..|  |.|||....:..|   :..:||:.|.:..|...|.......| ..|.
  Fly    51 DACHNLDSEQDLASKY--YGCTGEDAVRDLPPQLVLKSICECCYQLVQKFHDFQRMCAESLRNFE 113

  Fly    63 RFLKDV------REEESENDGSGCSEEVEAAERDLQDGADDVDSGNE------PDINEC------ 109
            :.|:|:      .|:.:.:|....||..|:...:.|..|..:.:..|      |.:  |      
  Fly   114 KLLQDIDIGCHKLEDHTWHDLDTPSESNESTNPEAQSHAPCIAATQEIVSFIWPQV--CLPLAVI 176

  Fly   110 ------------------DIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGER-PFTCSLCPKS 155
                              |..||:..|      .:...:.|.| :..|...|.| ...|.:|.:.
  Fly   177 LSRITLGASLEEEVYVIEDESAKQDLG------QEKLSISSKL-LGARKRRGVRHTLECRICHRG 234

  Fly   156 FGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHI-QMHERRGSLR----CPYCQKCFLTS 215
            |...|.|:.||:.|.|.||:.|.||.:|:...:.|::|: |||....:.|    ||.|.|.:..:
  Fly   235 FYKPSLLEAHMQQHEGLRPYTCVHCAKSYARANLLESHLRQMHNNADAARIIYACPSCNKVYTAN 299

  Fly   216 LILKQHL-ATH-------TDETQFKCSQCSKSFQVEHELWMHMRVH---QERLFTCGHCSKDFAL 269
            ..||.|: .||       :.:.:..|.:|.|.|..:..|..|..||   :.|.:.|..|.:.|..
  Fly   300 RSLKYHMRRTHERYHESESPDARHICEECGKCFARKAHLTRHKMVHGSVEGRRYCCECCDRRFYT 364

  Fly   270 HAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSH 323
            ...:..||.|.         ..:|.|    .|:|.||.:.|.:...|:.|.:.|
  Fly   365 KENMVDHLLRK---------HGNKNL----LLRCRKCGRIFQNSVELNAHGRKH 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 17/64 (27%)
COG5048 <119..241 CDD:227381 38/135 (28%)
C2H2 Zn finger 121..141 CDD:275368 3/19 (16%)
zf-H2C2_2 133..156 CDD:463886 6/23 (26%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:463886 11/22 (50%)
C2H2 Zn finger 177..197 CDD:275368 7/20 (35%)
C2H2 Zn finger 205..225 CDD:275368 7/20 (35%)
zf-C2H2_8 206..286 CDD:464935 23/90 (26%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368
CG10654NP_001261767.1 zf-AD 39..115 CDD:462262 17/65 (26%)
C2H2 Zn finger 228..248 CDD:275368 7/19 (37%)
SFP1 <243..310 CDD:227516 23/66 (35%)
C2H2 Zn finger 256..313 CDD:275368 19/56 (34%)
SFP1 <287..376 CDD:227516 24/97 (25%)
C2H2 Zn finger 289..314 CDD:275368 9/24 (38%)
C2H2 Zn finger 325..345 CDD:275368 6/19 (32%)
C2H2 Zn finger 355..376 CDD:275368 6/29 (21%)
C2H2 Zn finger 385..405 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.