DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and D19B

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_477297.1 Gene:D19B / 38717 FlyBaseID:FBgn0022699 Length:774 Species:Drosophila melanogaster


Alignment Length:485 Identity:116/485 - (23%)
Similarity:182/485 - (37%) Gaps:131/485 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASVFDESHEPGLSIAYIIYKCTGWQVEKHDPLSNTIC--------------KSCLEDAQ------ 46
            ::.:|....|||:....:  ||...||:.|.....:|              |.|::..|      
  Fly    23 SAAYDLFRVPGLAKKLCV--CTSLSVEQADGFPKNLCNVCFSKLNDLHDFQKQCVDSVQKFQDLV 85

  Fly    47 --NA------FDIIET---------YERSHQFYRFLKDVREEESENDG------SGCSEEVEAAE 88
              ||      ||:::|         .|..:..:..|.:.:.|..||:.      ....:|||..|
  Fly    86 ASNAFACQTNFDVLDTSAAVADLPGEEEDNVHFDPLLNSKIEIIENEEDVFKMLESVEKEVEEVE 150

  Fly    89 RDL--------QDGADDVDSGNEPDI-------NECDI--------------KAKEKPGFSCSH- 123
            .::        ||  |..:|||:.|:       ::.||              |||.||..:... 
  Fly   151 MEMEQPFGRVSQD--DSFESGNDNDLDADFQISSDDDIPLAQRSRRGATRGSKAKGKPKSAAKRQ 213

  Fly   124 ------------------CPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHT 170
                              .||....:..:....|..  .|...|.:|.:.|..:...:.||:.|.
  Fly   214 EEESEESEETSSSDDSDGNPKDKPKRKRIPATERDR--HRLIDCHICHQKFKKAIRYEEHMKHHN 276

  Fly   171 GERPFQCS--HCPRSFTAGHHLKAHIQ-MHERRGSLR-CPY--CQKCFLTSLILKQHL----ATH 225
            ...||||:  .|.:.||..:.|:.|:: .|....::. |.|  |.|.|...::|..|:    ...
  Fly   277 DLLPFQCTVESCRKGFTTANGLRVHVEHAHTETSAMHPCTYEGCNKSFARPVLLSFHMKRVHKVD 341

  Fly   226 TDETQFKCSQCSKSFQVEHELWMHMRVH--QERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSK 288
            |.:..|.|::|.|.|:....|..||..|  :|..|.|..|.|.|.:::.|:.||.|:|..     
  Fly   342 TPQRDFPCTECEKVFRCPTALKKHMYKHTGEELPFACEICGKRFPINSVLRDHLLRHAGI----- 401

  Fly   289 ASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPC-KSSGSKPAHSN------A 346
                      |...|..|....|.|...:.|:.:|||.|......| .:|.:|.|.:|      .
  Fly   402 ----------KNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECRQCDHASHNKQALANHVKVVHE 456

  Fly   347 QRKPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            :||.|.|..|.:||.:..|...|.::|||:
  Fly   457 KRKDFACQYCGKTFGKSHACKIHERSHTGE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 19/97 (20%)
COG5048 <119..241 CDD:227381 32/150 (21%)
C2H2 Zn finger 121..141 CDD:275368 3/38 (8%)
zf-H2C2_2 133..158 CDD:290200 5/24 (21%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
zf-H2C2_2 162..185 CDD:290200 8/24 (33%)
C2H2 Zn finger 177..197 CDD:275368 6/22 (27%)
C2H2 Zn finger 205..225 CDD:275368 7/25 (28%)
zf-C2H2_8 206..286 CDD:292531 27/87 (31%)
C2H2 Zn finger 233..253 CDD:275368 7/19 (37%)
C2H2 Zn finger 260..297 CDD:275368 9/36 (25%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
D19BNP_477297.1 zf-AD 12..83 CDD:214871 13/61 (21%)
C2H2 Zn finger 255..275 CDD:275368 5/19 (26%)
C2H2 Zn finger 283..335 CDD:275368 14/51 (27%)
C2H2 Zn finger 318..338 CDD:275368 5/19 (26%)
COG5048 <347..512 CDD:227381 47/155 (30%)
C2H2 Zn finger 349..369 CDD:275368 7/19 (37%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
C2H2 Zn finger 406..426 CDD:275368 5/19 (26%)
C2H2 Zn finger 434..455 CDD:275368 5/20 (25%)
C2H2 Zn finger 463..483 CDD:275368 6/19 (32%)
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 586..607 CDD:275368
C2H2 Zn finger 615..635 CDD:275368
zf-H2C2_2 627..652 CDD:290200
C2H2 Zn finger 643..663 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446566
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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