DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG4282

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:395 Identity:95/395 - (24%)
Similarity:145/395 - (36%) Gaps:110/395 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINE----------------CDIKA 113
            |.:..:||::.|.|.......::|.|  .|:|..||.::.:::.                ...|.
  Fly   228 LDEFVDEETDPDFSCLVPSDNSSEDD--GGSDGFDSDSDFELDNGKQEFAVLPKRTVVRPKKYKK 290

  Fly   114 KEKPG--------------------------------FSCSHCPKSFQVKSNLKVH----MRSH- 141
            :.||.                                ..|:.|        ||.||    |:.| 
  Fly   291 RTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAIC--------NLLVHNFTEMQRHH 347

  Fly   142 --TGE-RPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMH---ERR 200
              |.: .|.....|.:.|.....|..|:..|.....|:||.|.:||....||::|.|:|   ..:
  Fly   348 RLTHQVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVK 412

  Fly   201 GSLRCPYCQKCFLTSLILKQH-LATHTDETQFK--CSQCSKSFQVEHELWMHM-RVHQ-ERLFTC 260
            .:..|..|.|.||:...:..| |..|..:::||  ||:|:|.|..|.:|..|| .:|. |....|
  Fly   413 LTFSCDLCSKTFLSKTAIDYHKLNKHVPKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTIIC 477

  Fly   261 GHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHS-------KALKCGKCPKTFTDRSALST 318
            ..|.|.......||:                |:.|.||       :..:|..|.......:.|..
  Fly   478 DKCGKQMRTKIILKK----------------HQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQ 526

  Fly   319 HLKS-HTKNKPLLEGPC----KSSGSKPA------HSNAQRKPFKCSSCPRTFSRKSALLTHLQT 372
            |:|| |.::..  |..|    |.|.:..|      |::...:.|||:.|.:.|.|...|..|..|
  Fly   527 HMKSIHVESAG--EHRCHICAKVSPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELKEHTST 589

  Fly   373 HTGKL 377
            |||::
  Fly   590 HTGEV 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 40/135 (30%)
C2H2 Zn finger 121..141 CDD:275368 7/23 (30%)
zf-H2C2_2 133..156 CDD:463886 9/30 (30%)
C2H2 Zn finger 149..169 CDD:275368 4/19 (21%)
zf-H2C2_2 162..185 CDD:463886 8/22 (36%)
C2H2 Zn finger 177..197 CDD:275368 9/19 (47%)
C2H2 Zn finger 205..225 CDD:275368 7/20 (35%)
zf-C2H2_8 206..286 CDD:464935 25/84 (30%)
C2H2 Zn finger 233..253 CDD:275368 9/20 (45%)
C2H2 Zn finger 260..297 CDD:275368 7/36 (19%)
C2H2 Zn finger 303..323 CDD:275368 6/20 (30%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641 3/10 (30%)
C2H2 Zn finger 330..351 CDD:275368 8/28 (29%)
C2H2 Zn finger 360..378 CDD:275368 4/17 (24%)
LIM 361..>400 CDD:413332 12/38 (32%)
C2H2 Zn finger 386..406 CDD:275368 9/19 (47%)
C2H2 Zn finger 417..438 CDD:275368 7/20 (35%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 7/36 (19%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 5/20 (25%)
C2H2 Zn finger 570..590 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..619 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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