DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG17385

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001286418.1 Gene:CG17385 / 36603 FlyBaseID:FBgn0033934 Length:278 Species:Drosophila melanogaster


Alignment Length:279 Identity:73/279 - (26%)
Similarity:108/279 - (38%) Gaps:60/279 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FSCSHCPKSFQVKSNLKVH---MRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHC 180
            |||..|.::|:.|.:..:|   :.:| .:..:.|.||.|||..|..|..||:.|...|||.|:.|
  Fly    16 FSCKRCDRTFRSKRDQTLHRQEVHNH-NKTTYECKLCAKSFCNSGNLDRHMKVHNDVRPFVCNIC 79

  Fly   181 PRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHE 245
            .::|....:|:.|..:|.......|.:|.|.|.....:|:|..|||.|..|:|.:|.:.|     
  Fly    80 SKAFAQAVNLQRHYAVHSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYF----- 139

  Fly   246 LWMHMRVHQERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGH--SKALKCGKCPK 308
                                                  ||......|| |||  :|..:|..|.|
  Fly   140 --------------------------------------SQLVNLKKHK-LGHLNAKPYQCNYCEK 165

  Fly   309 TFTDRSALSTHLKSHTKNKPLLEGPCK---SSGSKPAHSNAQRKP--FKCSSCPRTFS-----RK 363
            .||..|....||:||.|....::.|..   ::........:::||  |:|..|...|.     .|
  Fly   166 GFTQLSNFKRHLQSHIKEGVDVDVPASIQAAAALARERLESEQKPSFFECMVCRAIFDTFADYEK 230

  Fly   364 SALLTHLQTHTGKLGTNRM 382
            .....|......:|..|:|
  Fly   231 HEAKCHEDHERAQLEVNQM 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 41/124 (33%)
C2H2 Zn finger 121..141 CDD:275368 5/22 (23%)
zf-H2C2_2 133..158 CDD:290200 8/27 (30%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
zf-H2C2_2 162..185 CDD:290200 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:292531 14/79 (18%)
C2H2 Zn finger 233..253 CDD:275368 3/19 (16%)
C2H2 Zn finger 260..297 CDD:275368 5/36 (14%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 353..373 CDD:275368 5/24 (21%)
CG17385NP_001286418.1 COG5048 <13..181 CDD:227381 59/209 (28%)
C2H2 Zn finger 18..39 CDD:275368 5/20 (25%)
C2H2 Zn finger 48..68 CDD:275368 10/19 (53%)
C2H2 Zn finger 76..96 CDD:275368 5/19 (26%)
C2H2 Zn finger 104..124 CDD:275368 6/19 (32%)
C2H2 Zn finger 132..148 CDD:275368 5/58 (9%)
C2H2 Zn finger 160..180 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446569
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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