DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and az2

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_610289.2 Gene:az2 / 35682 FlyBaseID:FBgn0025185 Length:593 Species:Drosophila melanogaster


Alignment Length:340 Identity:85/340 - (25%)
Similarity:134/340 - (39%) Gaps:76/340 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HDPLSNTIC-----KSCLEDAQNA------------FDIIETYERSHQFY-RFLKDVREEESEND 76
            :||.....|     ||.|.:..:.            :|:.::.:...|:| |.:|.:.:.:... 
  Fly   287 YDPAHKHFCNLNVRKSSLIEITDLLTSEFSLGLVTHYDVYDSIQSMRQWYSRRIKTLTDVQCVG- 350

  Fly    77 GSGCSEEVEAAERDLQDGADDVDSGNEPDINECD--IKAKE-KPGFSCSHCPKSFQVKSNLKVH- 137
                   :..||:..              |..|:  :..|. :....|..|..||.....|:.| 
  Fly   351 -------LSLAEKQY--------------IERCNSFMPTKSFRQKLKCEVCEHSFSTDHALQAHQ 394

  Fly   138 MRSH-TGERP-FTCSLCPKSFGYSSGLQNH-MRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHER 199
            .|.| .|:.. |.|:||..:|.....||.| .|.|. ::.|.|..|.|||..|:.|..|.:.|:.
  Fly   395 FRDHKMGDGGWFRCTLCELNFDRKCHLQQHSQRVHM-DKSFVCEICSRSFAFGNQLAIHKRTHDE 458

  Fly   200 RGSLR---CPYCQKCFLTSLILKQHL-ATHTDETQFKCSQCSKSFQVEHELWMHMRVHQE-RLFT 259
            :...:   |.:|.|||...:.:..|: |.||....|||..|.|.|..:.:|..|::.|.. |...
  Fly   459 KHVAKPFVCEFCGKCFKQKIQMTTHVTAVHTKIRAFKCDMCPKDFLTKRDLKDHVKAHLNIRDKV 523

  Fly   260 CGHCSKDFA-LHAYLK-RHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKS 322
            |..|.|.|. .:|.:| ||:              ||    .|.|:|..|...|::|.:|..|:: 
  Fly   524 CEVCQKAFTNANALVKHRHI--------------HK----EKTLQCSLCTTRFSERVSLGVHMR- 569

  Fly   323 HTKNKPLLEGPCKSS 337
              :...:|:....||
  Fly   570 --RTHKILKSSLSSS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 9/50 (18%)
COG5048 <119..241 CDD:227381 43/129 (33%)
C2H2 Zn finger 121..141 CDD:275368 7/20 (35%)
zf-H2C2_2 133..158 CDD:290200 10/27 (37%)
C2H2 Zn finger 149..169 CDD:275368 8/20 (40%)
zf-H2C2_2 162..185 CDD:290200 10/23 (43%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
C2H2 Zn finger 205..225 CDD:275368 7/20 (35%)
zf-C2H2_8 206..286 CDD:292531 26/83 (31%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 10/38 (26%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368
az2NP_610289.2 MADF_DNA_bdg 157..242 CDD:287510
GT1 276..>341 CDD:304916 10/53 (19%)
C2H2 Zn finger 377..398 CDD:275368 7/20 (35%)
C2H2 Zn finger 408..429 CDD:275368 8/20 (40%)
C2H2 Zn finger 436..456 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..488 CDD:275368 7/20 (35%)
C2H2 Zn finger 496..516 CDD:275368 6/19 (32%)
C2H2 Zn finger 524..544 CDD:275368 8/33 (24%)
C2H2 Zn finger 551..572 CDD:275368 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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