DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG12299

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster


Alignment Length:294 Identity:93/294 - (31%)
Similarity:143/294 - (48%) Gaps:45/294 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GADDVD---SGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKS 155
            ||..:|   :||:    :|         |.|:||..||....:|..|:|||...:||.||:|.|:
  Fly   239 GAPVMDPALNGNQ----KC---------FQCTHCEASFPNAGDLSKHVRSHITNKPFQCSICQKT 290

  Fly   156 FGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQ 220
            |.:...|..|:|.|:||:|::|..||::||....|..|::.|..|...:|..|.|.|:....|..
  Fly   291 FTHIGSLNTHIRIHSGEKPYKCELCPKAFTQSSSLMVHMRSHSVRKPHQCVQCDKGFINYSSLLL 355

  Fly   221 HLATHTDETQ-FKCSQCSKSFQVEHELWMHMRVH-QERLFTCGHCSKDFALHAYLKRHLSRNARC 283
            |..||...|: |.|.:|.:.|:.|..|..|||:| ||.::.|..|.:.|...:.|.:|:..:   
  Fly   356 HQKTHIAPTETFICPECEREFKAEALLDEHMRMHTQELVYQCAICREAFRASSELVQHMKNH--- 417

  Fly   284 SQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCK---------SSGS 339
                       :| .|...|..|.::||...:|:.|::.||..||.   .||         ||.|
  Fly   418 -----------MG-EKPFTCSLCDRSFTQSGSLNIHMRIHTGEKPF---QCKLCDKCFTQASSLS 467

  Fly   340 KPAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTH 373
            .....:|..||:.|..|.:::|:::.|..|:|.|
  Fly   468 VHMKIHAGEKPYPCPICGKSYSQQAYLNKHIQAH 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 46/122 (38%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..158 CDD:290200 12/24 (50%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 10/22 (45%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:292531 25/81 (31%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 5/36 (14%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 59/158 (37%)
C2H2 Zn finger 256..276 CDD:275368 8/19 (42%)
zf-H2C2_2 268..293 CDD:290200 12/24 (50%)
C2H2 Zn finger 284..304 CDD:275368 8/19 (42%)
zf-H2C2_2 296..321 CDD:290200 11/24 (46%)
zf-C2H2_2 312..>387 CDD:289522 25/74 (34%)
C2H2 Zn finger 312..332 CDD:275368 7/19 (37%)
C2H2 Zn finger 340..360 CDD:275368 6/19 (32%)
C2H2 Zn finger 369..389 CDD:275368 8/19 (42%)
C2H2 Zn finger 397..417 CDD:275368 5/19 (26%)
zf-H2C2_2 409..434 CDD:290200 7/39 (18%)
C2H2 Zn finger 425..445 CDD:275368 6/19 (32%)
zf-H2C2_2 437..462 CDD:290200 8/27 (30%)
C2H2 Zn finger 453..473 CDD:275368 5/19 (26%)
zf-H2C2_2 465..490 CDD:290200 7/24 (29%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D42822at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.110

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