DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and CG44002

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_608754.1 Gene:CG44002 / 33535 FlyBaseID:FBgn0264744 Length:345 Species:Drosophila melanogaster


Alignment Length:326 Identity:100/326 - (30%)
Similarity:159/326 - (48%) Gaps:70/326 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASVFDESHEPGLSIAYIIYKCTGWQVEKHDPLSNTICKSCLEDAQNAFDIIETYERSHQ-FYRF 64
            |.::|:|..:..:|||::|.:|||::|||.|.|.::||..|::||.|||.||:|||||:| ||..
  Fly    15 MVNIFEERQDLPVSIAHMIIECTGFKVEKGDSLPHSICPPCVKDAHNAFTIIKTYERSYQVFYEV 79

  Fly    65 LKDVREEE---------------------------------------------------SENDGS 78
            ...|.|||                                                   ||:.|.
  Fly    80 QDTVLEEELSEDVIIELSDSDEVILIDEQEEKVHLSENKAPTNEVSTQEESKTAQSDNVSEDKGH 144

  Fly    79 GCSE-----------EVEAAERDLQDGADDVDSGNEPDINECDIKAKEK-----PGFSCSHCPKS 127
            .|::           |:........||...:.|.:|..:.| :::.|.:     ...:|..|.|:
  Fly   145 ICTQCHMSFRRPGLLELHILRHHTTDGPRPMSSTSEHAVKE-ELRTKARQLSRNSTHTCRLCNKT 208

  Fly   128 FQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKA 192
            |..|::...|.::||||:||.|.:|.|.|...:.::.|:|||||||||:|..|..:|:.|..|:.
  Fly   209 FCSKASCVRHQKTHTGEKPFACEICQKPFADLASVKRHLRTHTGERPFKCLTCQSAFSDGSALRQ 273

  Fly   193 HIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRV-HQER 256
            ||::|......:|..|.|.|......::|:.:||.|.:||||||.:.|:....|..|::: |.::
  Fly   274 HIRIHTGERPYKCDMCDKFFRERSDARKHMMSHTAEKRFKCSQCERRFRQPKGLRRHVKLCHTDK 338

  Fly   257 L 257
            :
  Fly   339 V 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 32/62 (52%)
COG5048 <119..241 CDD:227381 48/121 (40%)
C2H2 Zn finger 121..141 CDD:275368 6/19 (32%)
zf-H2C2_2 133..156 CDD:463886 10/22 (45%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
zf-H2C2_2 162..185 CDD:463886 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
zf-C2H2_8 206..286 CDD:464935 17/53 (32%)
C2H2 Zn finger 233..253 CDD:275368 7/20 (35%)
C2H2 Zn finger 260..297 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
CG44002NP_608754.1 zf-AD 4..74 CDD:462262 30/58 (52%)
C2H2 Zn finger 146..166 CDD:275368 2/19 (11%)
COG5048 <162..302 CDD:227381 44/140 (31%)
C2H2 Zn finger 202..222 CDD:275368 6/19 (32%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
C2H2 Zn finger 258..278 CDD:275368 7/19 (37%)
SUF4-like 282..>342 CDD:411020 18/58 (31%)
C2H2 Zn finger 286..311 CDD:411020 8/24 (33%)
C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..335 CDD:411020 7/20 (35%)
C2H2 Zn finger 314..333 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.