DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and LOC3291928

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_061515636.1 Gene:LOC3291928 / 3291928 VectorBaseID:AGAMI1_009396 Length:217 Species:Anopheles gambiae


Alignment Length:46 Identity:13/46 - (28%)
Similarity:21/46 - (45%) Gaps:14/46 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 VSAGSILRVAGEGDSGPRGGPPGDLYVYLDVEDVR---GIERDGIN 344
            :|...:|....|.|.|           ::.:||||   |:|||.::
Mosquito   244 LSQSVLLTTPFEPDFG-----------FVGIEDVRTWFGLERDPVD 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381
C2H2 Zn finger 121..141 CDD:275368
zf-H2C2_2 133..156 CDD:463886
C2H2 Zn finger 149..169 CDD:275368
zf-H2C2_2 162..185 CDD:463886
C2H2 Zn finger 177..197 CDD:275368
C2H2 Zn finger 205..225 CDD:275368
zf-C2H2_8 206..286 CDD:464935
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 260..297 CDD:275368
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368
LOC3291928XP_061515636.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.