DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG9609

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster


Alignment Length:323 Identity:86/323 - (26%)
Similarity:127/323 - (39%) Gaps:81/323 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 DSGNEPDINECDIKAKEKPG---------FSCS--HCPKSFQVKSNLKVHMRSHTGERPFTCSL- 151
            ||..|..:.|    .|::.|         ::||  .|..:|:....|..|...|||.:...||. 
  Fly    10 DSDMETALEE----FKQRQGRRNSIGSAKYACSMPKCEATFKRLDQLDRHEYHHTGIKKHACSYE 70

  Fly   152 -CPKSFGYSSGLQNHMRTHTGERP-------FQCS--HCPRSFTAGHHLKAHI-QMHERRGSLRC 205
             |.|::...:.|:.|:|: |.|||       .:|:  .|.:.|.:..::..|: :.||......|
  Fly    71 GCDKTYSIVTHLKRHLRS-THERPESAAKKTVKCALEECSKMFISVSNMTRHMRETHESPKVYPC 134

  Fly   206 PYCQKCFLTSLILKQH-LATHTDETQFKCSQCSKSFQVEHELWMHMRVHQE--RLFTCGHCSKDF 267
            ..|...|...|.||:| :..||.|..:.||:||:.|   ::.| ..:.|:.  :|:.|..|...|
  Fly   135 SQCSAKFSQKLKLKRHEIREHTLEYPYSCSKCSRGF---YQQW-QCQSHEPSCKLYECPGCPLQF 195

  Fly   268 ALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLK----------- 321
            .......:|      |    :.|.|....|    ||.:|...|...|.|..||:           
  Fly   196 DKWTLYTKH------C----RDSLHGKNRH----KCDRCDSAFDKPSELKRHLEVKHKEAAQTDE 246

  Fly   322 ---SHTKNKPLLEGPCKSSGS---------KPAHSNAQRKPFKCSS--CPRTFSRKSALLTHL 370
               |.|.|:   || |..|.|         ..|||.   :.|:|.:  |.|.||....|..||
  Fly   247 CATSFTCNE---EG-CGKSYSYLRNLRQHMLTAHSG---RRFECQALDCGRCFSSAQNLARHL 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 40/136 (29%)
C2H2 Zn finger 121..141 CDD:275368 6/21 (29%)
zf-H2C2_2 133..158 CDD:290200 9/26 (35%)
C2H2 Zn finger 149..169 CDD:275368 7/21 (33%)
zf-H2C2_2 162..185 CDD:290200 9/31 (29%)
C2H2 Zn finger 177..197 CDD:275368 4/22 (18%)
C2H2 Zn finger 205..225 CDD:275368 7/20 (35%)
zf-C2H2_8 206..286 CDD:292531 22/82 (27%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 7/36 (19%)
C2H2 Zn finger 303..323 CDD:275368 7/33 (21%)
C2H2 Zn finger 353..373 CDD:275368 8/20 (40%)
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 4/18 (22%)
zf-C2H2_8 67..150 CDD:292531 23/83 (28%)
C2H2 Zn finger 67..90 CDD:275368 7/23 (30%)
C2H2 Zn finger 106..126 CDD:275368 3/19 (16%)
C2H2 Zn finger 134..155 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..210 CDD:275368 6/31 (19%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..276 CDD:275368 6/26 (23%)
C2H2 Zn finger 283..302 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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