DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG4318

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_572860.2 Gene:CG4318 / 32266 FlyBaseID:FBgn0030455 Length:236 Species:Drosophila melanogaster


Alignment Length:221 Identity:68/221 - (30%)
Similarity:102/221 - (46%) Gaps:26/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASVFDESHEPGLSIAYIIYKCTGWQVEKHDPLSNTICKSCLEDAQNAF--DIIETYERSHQFYR 63
            |..:|:....||:|:|.:|....|:.|...||...|||:||..|||.|:  |.::..|:......
  Fly    16 MLCIFETMPLPGVSLATMISDWCGFPVLPKDPFPKTICQSCALDAQTAYGMDSVQVIEQDEMVVS 80

  Fly    64 FLKDVREEESENDGS-------GCSEEVEAAERDLQDGADDVD----------SGNEPDIN-ECD 110
            .:.  .|||..||..       ..|:|:|..:..:....|:|:          :||....: :.|
  Fly    81 EMN--YEEEGSNDSDVELIEPVDGSQEMETIDLTIDSPGDNVENMCPNSNSNGNGNVSQSSAQKD 143

  Fly   111 IKAKE-KPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGE-- 172
            .|.|. |....|:.|.|.|.:.::||.||..|..|:|:.|..|.:|:....||:.|.|.|:..  
  Fly   144 TKKKMLKKTHKCNICGKYFMLPAHLKCHMWVHAREKPYKCLQCSQSYAQIRGLRRHERVHSSRPE 208

  Fly   173 -RPFQCSHCPRSFTAGHHLKAHIQMH 197
             |.::||.||:.|.....||.|..||
  Fly   209 LRSYKCSRCPKIFNRNSALKNHETMH 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 22/63 (35%)
COG5048 <119..241 CDD:227381 30/82 (37%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..156 CDD:463886 9/22 (41%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:463886 9/25 (36%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
C2H2 Zn finger 205..225 CDD:275368
zf-C2H2_8 206..286 CDD:464935
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 260..297 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
CG4318NP_572860.2 zf-AD 5..77 CDD:462262 22/60 (37%)
C2H2 Zn finger 155..175 CDD:275368 8/19 (42%)
C2H2 Zn finger 183..203 CDD:275368 7/19 (37%)
C2H2 Zn finger 214..234 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.

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