DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG10959

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_572451.1 Gene:CG10959 / 31743 FlyBaseID:FBgn0030010 Length:443 Species:Drosophila melanogaster


Alignment Length:316 Identity:76/316 - (24%)
Similarity:119/316 - (37%) Gaps:48/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 EEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINECDIKAKEKPGFSCSHCPKSFQVKSNL 134
            :..|.:...||:.|......:.||...|.|......:.:   |.::...::|.||.:.:..:..|
  Fly   155 DSSSASVNEGCALEALLGVENPQDYQPDEDGEEHQSVFK---KQRQPKDYNCPHCDRRYTTQKYL 216

  Fly   135 KVHMR-SHTGERPFTCSLCPKSFGYSSGLQNHMR-THTGERPFQCSHCPRSFTAGHHLKAHIQMH 197
            ..|:: ||...:.|.|..|..:|.....|..|.| .||   .|.|..|.:.|.:...|..|:|.|
  Fly   217 NTHLKMSHPFPQAFKCVDCKATFDVDRALAQHRRKEHT---EFACQLCDKVFKSSRSLLRHVQGH 278

  Fly   198 ERRGSLRCPY--CQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQ-ERLFT 259
            ....:.:|.:  |.|.|:....|..|...|::|..:.|..|....:....|.:|.|.|. |:.|.
  Fly   279 SGARTFKCEHENCGKSFVNQHNLTSHRRVHSEERNYVCELCGYRSRYREALIVHRRTHTGEKPFQ 343

  Fly   260 CGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHT 324
            |..|::.||..:.|..|            .:.|.|   .|..||.||...|:...||..|     
  Fly   344 CQTCARRFASKSLLNEH------------QAMHST---EKPYKCDKCDSAFSRPKALYHH----- 388

  Fly   325 KNKPLLEGPCKSSGSKPAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTHTGKLGTN 380
                             .|.:...|.|||..|...:::.:.|..|::.|..:...|
  Fly   389 -----------------KHLHLGIKKFKCKICGNAYAQAAGLSAHMRAHKLQASVN 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 34/125 (27%)
C2H2 Zn finger 121..141 CDD:275368 5/20 (25%)
zf-H2C2_2 133..156 CDD:463886 7/23 (30%)
C2H2 Zn finger 149..169 CDD:275368 6/20 (30%)
zf-H2C2_2 162..185 CDD:463886 8/23 (35%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 6/21 (29%)
zf-C2H2_8 206..286 CDD:464935 21/82 (26%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 4/19 (21%)
CG10959NP_572451.1 C2H2 Zn finger 232..253 CDD:275368 6/20 (30%)
COG5048 <258..416 CDD:227381 47/194 (24%)
C2H2 Zn finger 258..278 CDD:275368 6/19 (32%)
C2H2 Zn finger 289..308 CDD:275368 5/18 (28%)
C2H2 Zn finger 316..336 CDD:275368 5/19 (26%)
C2H2 Zn finger 344..364 CDD:275368 6/31 (19%)
C2H2 Zn finger 372..392 CDD:275368 8/41 (20%)
C2H2 Zn finger 400..420 CDD:275368 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.

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