DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG2116

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:321 Identity:77/321 - (23%)
Similarity:120/321 - (37%) Gaps:73/321 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LKDVREEESENDGSGCSEEVEAAERDLQDGAD---------------DVDSGNEP--------DI 106
            |:....:::.:|..|..:||:.:|:.|::...               |.|..:.|        ||
  Fly   183 LRSFVSQKNNDDDDGSVKEVKPSEKMLEEFKGPRRYMLFDDLIATIVDFDEDSTPLVEFSMISDI 247

  Fly   107 NECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSH--TGERPFTCSLCPKSFGYSSGLQNHMRTH 169
            .:      ||....|..||.... ||.|..|.::|  .|...:.|..|.:::.....|..|.|.|
  Fly   248 MD------EKLPVECGICPDVMH-KSKLSKHHKTHLVPGTNRYACIYCTETYRDCKYLAGHARRH 305

  Fly   170 TGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHL-ATHTDETQFKC 233
            .|.||:.|..|...|:....|:.|.|.........|..|.|.|..:..||:|. |||..:.:|:|
  Fly   306 MGIRPYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQC 370

  Fly   234 SQCSKSFQVEHELWMHMR-VH--QERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTL 295
            ..|.|::.....|..|:| ||  :.|:..|..|                ..:|     ..|||..
  Fly   371 EYCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFC----------------GMQC-----RDAHKMA 414

  Fly   296 GHSKALK-------CGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQRK 349
            .|.|.:.       |..|.:.|||.|....|.:|.         .|:|:..:..:::..|:
  Fly   415 RHRKEMHLSQGTYVCHLCQEEFTDISYFDAHKRSI---------QCRSNTRRFVNADGNRE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 38/124 (31%)
C2H2 Zn finger 121..141 CDD:275368 7/19 (37%)
zf-H2C2_2 133..156 CDD:463886 6/24 (25%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
zf-H2C2_2 162..185 CDD:463886 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 8/20 (40%)
zf-C2H2_8 206..286 CDD:464935 22/83 (27%)
C2H2 Zn finger 233..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 260..297 CDD:275368 6/36 (17%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 7/19 (37%)
zf-C2H2_8 257..339 CDD:464935 23/82 (28%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 14/48 (29%)
C2H2 Zn finger 313..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
C2H2 Zn finger 370..388 CDD:275368 5/17 (29%)
C2H2 Zn finger 400..418 CDD:275370 7/38 (18%)
C2H2 Zn finger 429..447 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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