DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and CG2116

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:321 Identity:77/321 - (23%)
Similarity:120/321 - (37%) Gaps:73/321 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LKDVREEESENDGSGCSEEVEAAERDLQDGAD---------------DVDSGNEP--------DI 106
            |:....:::.:|..|..:||:.:|:.|::...               |.|..:.|        ||
  Fly   183 LRSFVSQKNNDDDDGSVKEVKPSEKMLEEFKGPRRYMLFDDLIATIVDFDEDSTPLVEFSMISDI 247

  Fly   107 NECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSH--TGERPFTCSLCPKSFGYSSGLQNHMRTH 169
            .:      ||....|..||.... ||.|..|.::|  .|...:.|..|.:::.....|..|.|.|
  Fly   248 MD------EKLPVECGICPDVMH-KSKLSKHHKTHLVPGTNRYACIYCTETYRDCKYLAGHARRH 305

  Fly   170 TGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHL-ATHTDETQFKC 233
            .|.||:.|..|...|:....|:.|.|.........|..|.|.|..:..||:|. |||..:.:|:|
  Fly   306 MGIRPYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQC 370

  Fly   234 SQCSKSFQVEHELWMHMR-VH--QERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTL 295
            ..|.|::.....|..|:| ||  :.|:..|..|                ..:|     ..|||..
  Fly   371 EYCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFC----------------GMQC-----RDAHKMA 414

  Fly   296 GHSKALK-------CGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQRK 349
            .|.|.:.       |..|.:.|||.|....|.:|.         .|:|:..:..:::..|:
  Fly   415 RHRKEMHLSQGTYVCHLCQEEFTDISYFDAHKRSI---------QCRSNTRRFVNADGNRE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 38/124 (31%)
C2H2 Zn finger 121..141 CDD:275368 7/19 (37%)
zf-H2C2_2 133..158 CDD:290200 6/26 (23%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
zf-H2C2_2 162..185 CDD:290200 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 8/20 (40%)
zf-C2H2_8 206..286 CDD:292531 22/83 (27%)
C2H2 Zn finger 233..253 CDD:275368 6/20 (30%)
C2H2 Zn finger 260..297 CDD:275368 6/36 (17%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 7/19 (37%)
C2H2 Zn finger 285..305 CDD:275368 5/19 (26%)
PHA00733 <308..357 CDD:177301 14/48 (29%)
C2H2 Zn finger 313..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
C2H2 Zn finger 370..388 CDD:275368 5/17 (29%)
C2H2 Zn finger 400..418 CDD:275370 7/38 (18%)
C2H2 Zn finger 429..447 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446572
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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