DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and LOC110437819

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_021324630.1 Gene:LOC110437819 / 110437819 -ID:- Length:354 Species:Danio rerio


Alignment Length:351 Identity:115/351 - (32%)
Similarity:162/351 - (46%) Gaps:38/351 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDL-QDGADDVDSGNEPDI 106
            ||.:...|::|..|...         |::.........:.::...|:.| .:.|.|...||..:.
Zfish    13 EDTEEQIDLVEVNEDKW---------RQKPPHFTSENVNTDITKTEQSLTTNQAGDCLKGNVTEY 68

  Fly   107 NECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTG 171
                |:...:  |:|..|.|:::.|.||.||||.|||||||.|:.|.|||.....|:.|.|.|||
Zfish    69 ----IRINGR--FTCVQCGKNYEHKGNLNVHMRIHTGERPFACNHCGKSFSNKGNLEKHFRIHTG 127

  Fly   172 ERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQC 236
            ||||.|.||.:||........|:::|.|.....|..|.|.|:....||.||..|::|..|.|:||
Zfish   128 ERPFICEHCGKSFYDKGKFNEHMKIHTRDSLFTCTQCGKGFIQKAGLKSHLKVHSEERPFVCAQC 192

  Fly   237 SKSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNAR-----CSQSSKA------ 289
            .|||:.|..|..|...|. .|.|:|..|.|.|...:.|:.||..:|.     ||...|:      
Zfish   193 GKSFKTESNLKSHQLSHSGVRSFSCDQCEKTFIRASNLREHLKVHAGLKPHVCSLCEKSFLRLET 257

  Fly   290 -SAHKTLGHS--KALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPC-KS---SGSKPAHSNAQ 347
             ..|..: |:  :...|..|..:||....|..|.:.||..||.....| ||   ||:...|....
Zfish   258 LQIHTRI-HTGVRPYTCSDCGNSFTILGDLKKHQRIHTGEKPHTCSHCGKSFTFSGNLKNHERVH 321

  Fly   348 --RKPFKCSSCPRTFSRKSALLTHLQ 371
              .||::|.||.::|::.|.|..|::
Zfish   322 TGEKPYQCLSCGKSFNQLSNLRVHIK 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 5/19 (26%)
COG5048 <119..241 CDD:227381 57/121 (47%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..158 CDD:290200 18/24 (75%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 14/22 (64%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 8/19 (42%)
zf-C2H2_8 206..286 CDD:292531 32/85 (38%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 12/48 (25%)
C2H2 Zn finger 303..323 CDD:275368 6/19 (32%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
LOC110437819XP_021324630.1 C2H2 Zn finger 77..97 CDD:275368 10/19 (53%)
zf-H2C2_2 89..114 CDD:316026 18/24 (75%)
C2H2 Zn finger 105..125 CDD:275368 8/19 (42%)
COG5048 <106..351 CDD:227381 83/243 (34%)
C2H2 Zn finger 133..153 CDD:275368 6/19 (32%)
C2H2 Zn finger 161..181 CDD:275368 8/19 (42%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 245..265 CDD:275368 4/20 (20%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
C2H2 Zn finger 329..347 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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