DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and znf1008

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_005171144.1 Gene:znf1008 / 101886637 ZFINID:ZDB-GENE-131121-84 Length:390 Species:Danio rerio


Alignment Length:373 Identity:124/373 - (33%)
Similarity:165/373 - (44%) Gaps:71/373 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINECD--------------IKAKEKPG 118
            |.:||...:.|..|||..::      |::...........:|.              |...|:| 
Zfish    24 VEDEEVNEEKSSTSEEKSSS------GSETAPPKGSFSCPQCGKSFTRKGHLEVHMVIHTGERP- 81

  Fly   119 FSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRS 183
            ::|..|.|||..|.:||.|.|.|||||||||..|.|||..|.||:.|:|.|||||||.|..|.:|
Zfish    82 YTCPQCAKSFTCKGSLKDHFRIHTGERPFTCPQCEKSFTNSGGLKRHLRIHTGERPFTCRQCAKS 146

  Fly   184 FTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWM 248
            |.:...||.|:::|.|.....||.|.|.:....:|::|..||:.|..|.|:.|.|||..:..|.:
Zfish   147 FPSSGELKRHMRIHSRDRPYTCPQCGKSYKQKEVLREHTKTHSGEKPFTCTLCGKSFTQQSTLKV 211

  Fly   249 HMRVHQ-----------------------------ERLFTCGHCSKDFALHAYLKRHL-----SR 279
            ||:||.                             ||.|:|..|.|.|.|..:||.|:     .|
Zfish   212 HMKVHSGEKLHQCPECGRRFAEACNLKTHLLSHTGERPFSCEKCEKKFFLAVHLKTHMRIHEDER 276

  Fly   280 NARCSQSSKA--------SAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPC-- 334
            ...||...|:        ...||....|..:|.:|.|||...:.|..|.:.||..||.....|  
Zfish   277 RYVCSFCGKSFLWLNGFKDHQKTHIGEKPYECLECGKTFARAAELKVHERIHTGEKPYKCSHCEK 341

  Fly   335 ---KSSGSKPAHSNAQ--RKPFKCSSCPRTFSRKSALLTHLQTHTGKL 377
               :|||.| .|....  .||:.|.:|.:||||..:|..||:....||
Zfish   342 SFTQSSGLK-VHERVHTGEKPYLCPTCGKTFSRYGSLAKHLKKACPKL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 58/121 (48%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..156 CDD:463886 15/22 (68%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
zf-H2C2_2 162..185 CDD:463886 13/22 (59%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 33/113 (29%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 14/49 (29%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 9/19 (47%)
znf1008XP_005171144.1 C2H2 Zn finger 56..76 CDD:275368 1/19 (5%)
COG5048 80..>383 CDD:227381 111/304 (37%)
C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
C2H2 Zn finger 112..132 CDD:275368 10/19 (53%)
C2H2 Zn finger 140..160 CDD:275368 7/19 (37%)
C2H2 Zn finger 168..188 CDD:275368 6/19 (32%)
C2H2 Zn finger 196..216 CDD:275368 8/19 (42%)
C2H2 Zn finger 224..244 CDD:275368 0/19 (0%)
C2H2 Zn finger 252..272 CDD:275368 8/19 (42%)
C2H2 Zn finger 280..300 CDD:275368 4/19 (21%)
C2H2 Zn finger 308..328 CDD:275368 7/19 (37%)
C2H2 Zn finger 336..356 CDD:275368 6/20 (30%)
C2H2 Zn finger 364..382 CDD:275368 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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