DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and si:cabz01054394.5

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_021330973.1 Gene:si:cabz01054394.5 / 101886221 ZFINID:ZDB-GENE-161017-87 Length:441 Species:Danio rerio


Alignment Length:426 Identity:122/426 - (28%)
Similarity:161/426 - (37%) Gaps:125/426 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 FLKDVREEESENDGSGCSEEVE---------AAERDLQDGADDVDSGNEPDINEC---------- 109
            |:|..|||.:..:......|..         ..|:|..:..|:....|..|:.:|          
Zfish     5 FIKKEREELTIEEPLSVKREYTEQQTGLMPLKKEQDFTEMDDNDQLENHHDLRKCTQTERTSSQK 69

  Fly   110 --------------------DIKAK----------EKPGFSCSHCPKSFQVKSNLKVHMRSHTGE 144
                                |.|.|          ||| |||..|.|||..|.||||||..||||
Zfish    70 TSPKRKPTSPVSCSQCGKSFDRKKKLDVHMTIHTGEKP-FSCQQCGKSFTQKGNLKVHMGIHTGE 133

  Fly   145 RPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHE----------- 198
            ...:|..|.|||.....|:.|||.||||:|:.|..|.:|||..::|.||::.|.           
Zfish   134 NSVSCQQCGKSFTQKINLKVHMRIHTGEKPYSCGQCGQSFTHKNNLNAHMRSHSGQKMFMCGQCG 198

  Fly   199 ----RRGSL-------------RCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHEL 246
                |:|.|             :|..|.:.|.....|..|:..||.|..|.|.||.|||:.:..|
Zfish   199 TRFTRKGGLENHMRIHTGEKPFKCGQCGRRFTRKASLGTHMKIHTGEKPFPCDQCRKSFRRKVTL 263

  Fly   247 WMHMRVHQ-ERLFTCGHCSKDF----------ALHAYLKRHLSRNARCSQ---SSKASAHKTLGH 297
            ..|.|:|. ||.|.|..|.|.|          .:|:..:.|.....:|.|   |.:...:..|..
Zfish   264 DSHKRIHTGERPFVCFQCGKSFRFTGNLNQHMRIHSNKRTHNLNGFKCLQRGGSFRDFRNHLLTK 328

  Fly   298 SKALKCGKCPKTFTDRSALSTHLKSHTKNKPL---------LEGPCKSSGSK------------- 340
            .||..|..|.|:||:    |.:||.||..||.         |:.|......|             
Zfish   329 EKAFMCRCCGKSFTN----SRNLKLHTGKKPFKCLEKSFTHLKNPLPGRSGKRWLNCDQRDKTFI 389

  Fly   341 -PAH------SNAQRKPFKCSSCPRTFSRKSALLTH 369
             .:|      |:|..:|:.|.||.:.|...|.|..|
Zfish   390 LASHLQIHLKSHADFRPYLCCSCGKRFQWLSNLKWH 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 58/149 (39%)
C2H2 Zn finger 121..141 CDD:275368 12/19 (63%)
zf-H2C2_2 133..156 CDD:463886 13/22 (59%)
C2H2 Zn finger 149..169 CDD:275368 9/19 (47%)
zf-H2C2_2 162..185 CDD:463886 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
zf-C2H2_8 206..286 CDD:464935 29/93 (31%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 10/49 (20%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 353..373 CDD:275368 7/17 (41%)
si:cabz01054394.5XP_021330973.1 COG5048 <50..308 CDD:227381 81/258 (31%)
C2H2 Zn finger 82..102 CDD:275368 3/19 (16%)
C2H2 Zn finger 110..130 CDD:275368 12/19 (63%)
C2H2 Zn finger 138..158 CDD:275368 9/19 (47%)
C2H2 Zn finger 166..186 CDD:275368 8/19 (42%)
C2H2 Zn finger 194..214 CDD:275368 3/19 (16%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
C2H2 Zn finger 278..298 CDD:275368 4/19 (21%)
C2H2 Zn finger 334..350 CDD:275368 8/19 (42%)
C2H2 Zn finger 358..401 CDD:275368 4/42 (10%)
C2H2 Zn finger 409..426 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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