DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and LOC101882267

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_005164442.3 Gene:LOC101882267 / 101882267 -ID:- Length:397 Species:Danio rerio


Alignment Length:320 Identity:103/320 - (32%)
Similarity:150/320 - (46%) Gaps:60/320 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 IKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPF 175
            :|.|:|..|:|:.|.:|...|.|||||||.||||:|||||.|.|||..:|.|..||..||||:..
Zfish    65 LKRKDKKCFTCTECGRSLSNKENLKVHMRIHTGEKPFTCSQCGKSFRDASNLNKHMLIHTGEKTH 129

  Fly   176 QCSHCPRSFTAGHHLKAHIQMHER---------------RGSLR-------------CPYCQKCF 212
            .|..|.::|.....|..|:::|.:               :.|||             |..|:|.|
Zfish   130 TCGQCSKTFLRASELNDHLRVHTKEKLYSCALCGKSFANQTSLRYHQKTHTGVREYVCFECEKTF 194

  Fly   213 LTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFA-------- 268
            :|:.|||||...||.|..:||:.|...|........|.|.|. |:.:.|.||.|.|:        
Zfish   195 ITAAILKQHQMIHTGEKPYKCAHCDMRFMYLGSQKTHERTHTGEKPYKCAHCDKRFSRIENQKSH 259

  Fly   269 --LHA----YLKRHLS---RNARCSQSSKASAHKTLGHS--KALKCGKCPKTFTDRSALSTHLKS 322
              :|.    |:..|.:   |:|:|.:.     |:.: |:  |..||..|.|.|:......:|.:.
Zfish   260 ERIHTGEKPYMCSHCNKRFRDAKCLKQ-----HQRI-HTGEKPYKCSHCDKRFSCIGNQKSHERM 318

  Fly   323 HTKNKPLLEGPC----KSSGSKPAHS--NAQRKPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            ||..|......|    :..|::.:|.  :.:.||::||.|...||:..:|..|...|:|:
Zfish   319 HTAEKLYKCSHCDKRFRHLGNQKSHERIHTREKPYRCSHCDMRFSQLRSLKIHENIHSGE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 58/149 (39%)
C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-H2C2_2 133..158 CDD:290200 20/24 (83%)
C2H2 Zn finger 149..169 CDD:275368 10/19 (53%)
zf-H2C2_2 162..185 CDD:290200 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
C2H2 Zn finger 205..225 CDD:275368 10/19 (53%)
zf-C2H2_8 206..286 CDD:292531 31/97 (32%)
C2H2 Zn finger 233..253 CDD:275368 5/19 (26%)
C2H2 Zn finger 260..297 CDD:275368 12/53 (23%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
LOC101882267XP_005164442.3 COG5048 68..>377 CDD:227381 101/314 (32%)
C2H2 Zn finger 75..95 CDD:275368 11/19 (58%)
C2H2 Zn finger 103..123 CDD:275368 10/19 (53%)
C2H2 Zn finger 131..151 CDD:275368 5/19 (26%)
C2H2 Zn finger 159..179 CDD:275368 3/19 (16%)
C2H2 Zn finger 187..207 CDD:275368 10/19 (53%)
C2H2 Zn finger 215..235 CDD:275368 5/19 (26%)
C2H2 Zn finger 243..263 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 5/25 (20%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..347 CDD:275368 3/19 (16%)
C2H2 Zn finger 355..375 CDD:275368 7/19 (37%)
C2H2 Zn finger 380..396 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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