DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and LOC100535113

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_003198560.1 Gene:LOC100535113 / 100535113 -ID:- Length:331 Species:Danio rerio


Alignment Length:268 Identity:96/268 - (35%)
Similarity:136/268 - (50%) Gaps:22/268 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 EKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSH 179
            ||| :||..|.|||:....||||||:|||||.:||..|.:.|..:.....|||.||||||:.|..
Zfish    75 EKP-YSCPQCGKSFKQNGYLKVHMRTHTGERCYTCQQCGQRFYTTGNFAQHMRIHTGERPYICLQ 138

  Fly   180 CPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEH 244
            |.:|.....:|.||:::|.......|..|.|.|..:..|:.|:..|.|...|.|.||.|||..:.
Zfish   139 CGKSLYQSANLAAHMRIHTVEKPYSCIQCGKSFKQNSSLEAHIRAHDDGRIFTCPQCGKSFAQKQ 203

  Fly   245 ELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPK 308
            :|.:|||:|. |:.:||..|.|.|...:.||:|:..:.|               .|...|.:|.:
Zfish   204 DLEIHMRIHTGEKPYTCTECGKSFRFKSTLKQHMISHTR---------------EKPFTCAQCGR 253

  Fly   309 TFTDRSALSTHLKSHTKNKPLLEGPC-KSSGSKPAHSNAQR----KPFKCSSCPRTFSRKSALLT 368
            :||.:|:|..|:..||.........| ||...|.:..|..:    :.|:||.|.:.|..|.:|.|
Zfish   254 SFTTKSSLMNHMNVHTGTIVFTCDQCGKSLTRKDSIKNHMKTHSVECFRCSECGKGFKSKRSLNT 318

  Fly   369 HLQTHTGK 376
            |::.|.|:
Zfish   319 HMKLHNGE 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 51/121 (42%)
C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-H2C2_2 133..158 CDD:290200 15/24 (63%)
C2H2 Zn finger 149..169 CDD:275368 6/19 (32%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:292531 29/80 (36%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
LOC100535113XP_003198560.1 COG5048 <50..232 CDD:227381 66/157 (42%)
C2H2 Zn finger 52..72 CDD:275368
zf-H2C2_2 64..89 CDD:290200 9/14 (64%)
C2H2 Zn finger 80..100 CDD:275368 11/19 (58%)
C2H2 Zn finger 108..128 CDD:275368 6/19 (32%)
C2H2 Zn finger 136..156 CDD:275368 6/19 (32%)
zf-H2C2_2 148..173 CDD:290200 8/24 (33%)
COG5048 <160..297 CDD:227381 45/151 (30%)
C2H2 Zn finger 164..184 CDD:275368 6/19 (32%)
C2H2 Zn finger 192..212 CDD:275368 10/19 (53%)
zf-H2C2_2 204..227 CDD:290200 10/22 (45%)
C2H2 Zn finger 220..240 CDD:275368 7/19 (37%)
zf-H2C2_2 233..257 CDD:290200 8/38 (21%)
C2H2 Zn finger 248..268 CDD:275368 7/19 (37%)
C2H2 Zn finger 276..296 CDD:275368 5/19 (26%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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