DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and si:ch211-162i8.2

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_021331195.1 Gene:si:ch211-162i8.2 / 100333435 ZFINID:ZDB-GENE-110913-56 Length:1662 Species:Danio rerio


Alignment Length:348 Identity:124/348 - (35%)
Similarity:173/348 - (49%) Gaps:42/348 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 FLKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINECDIKAKEKPG---------- 118
            |:|    ||||:  ....|.......|||:..|.::...|....|..:|.:||..          
Zfish     3 FIK----EESED--VKIEETFRVKHEDLQEQTDLIEENEESKEEEHHVKIEEKTHLQTDGILKRR 61

  Fly   119 ----FSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSH 179
                .:|:.|.|||...|:|..|||.||||:||||:.|.|||.:||.|..|||.||||:||.|:.
Zfish    62 DKNCLTCTQCGKSFSQSSSLNQHMRIHTGEKPFTCTQCGKSFSHSSSLNLHMRIHTGEKPFTCTQ 126

  Fly   180 CPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEH 244
            |.:||:....|..|:::|.......|..|.|||..|..|.||:..||.|..|.|:.|.|||.:..
Zfish   127 CGKSFSHSSSLNLHMRIHTGEKPFTCTQCGKCFSQSSNLNQHMRIHTKEKPFTCTYCGKSFSLSS 191

  Fly   245 ELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRN--------ARC----SQSSKASAHKTLG 296
            .|.:|||:|. |:.|.|..|.|.|:..::|..|...:        ::|    ||||..:.|..: 
Zfish   192 SLNIHMRIHTGEKPFACTQCGKSFSCLSHLNHHKWIHTGEKPFTCSQCGKSFSQSSSLNIHMRI- 255

  Fly   297 HS--KALKCGKCPKTFTDRSALSTHLKSHTKNKPLL------EGPCKSSGSKPAHSNAQRKPFKC 353
            |:  |...|.:|.|:|:..|:|:.|::.||..||..      ...|.|..:|....:...|||.|
Zfish   256 HTGEKPFTCTQCGKSFSQSSSLNIHMRIHTGEKPFTCTQCGKSFNCSSLLNKHMKIHTGEKPFAC 320

  Fly   354 SSCPRTFSRKSALLTHLQTHTGK 376
            :.|.|:||..|:|..|:..|||:
Zfish   321 TQCGRSFSHSSSLNRHMMRHTGE 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 58/121 (48%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..158 CDD:290200 16/24 (67%)
C2H2 Zn finger 149..169 CDD:275368 11/19 (58%)
zf-H2C2_2 162..185 CDD:290200 13/22 (59%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 9/19 (47%)
zf-C2H2_8 206..286 CDD:292531 32/92 (35%)
C2H2 Zn finger 233..253 CDD:275368 9/19 (47%)
C2H2 Zn finger 260..297 CDD:275368 12/48 (25%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
si:ch211-162i8.2XP_021331195.1 COG5048 62..471 CDD:227381 108/283 (38%)
C2H2 Zn finger 68..88 CDD:275368 10/19 (53%)
C2H2 Zn finger 96..116 CDD:275368 11/19 (58%)
C2H2 Zn finger 124..144 CDD:275368 6/19 (32%)
C2H2 Zn finger 152..172 CDD:275368 9/19 (47%)
C2H2 Zn finger 180..200 CDD:275368 9/19 (47%)
C2H2 Zn finger 208..228 CDD:275368 6/19 (32%)
C2H2 Zn finger 236..256 CDD:275368 6/20 (30%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 292..312 CDD:275368 3/19 (16%)
C2H2 Zn finger 320..340 CDD:275368 8/19 (42%)
C2H2 Zn finger 349..368 CDD:275368
C2H2 Zn finger 376..396 CDD:275368
C2H2 Zn finger 404..424 CDD:275368
COG5048 428..840 CDD:227381
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..480 CDD:275368
C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 516..536 CDD:275368
C2H2 Zn finger 544..564 CDD:275368
C2H2 Zn finger 572..592 CDD:275368
C2H2 Zn finger 600..620 CDD:275368
C2H2 Zn finger 630..650 CDD:275368
C2H2 Zn finger 658..678 CDD:275368
C2H2 Zn finger 686..706 CDD:275368
C2H2 Zn finger 714..734 CDD:275368
COG5048 737..1152 CDD:227381
C2H2 Zn finger 742..762 CDD:275368
C2H2 Zn finger 770..790 CDD:275368
C2H2 Zn finger 798..818 CDD:275368
C2H2 Zn finger 826..846 CDD:275368
C2H2 Zn finger 854..874 CDD:275368
C2H2 Zn finger 882..902 CDD:275368
C2H2 Zn finger 910..930 CDD:275368
C2H2 Zn finger 938..958 CDD:275368
C2H2 Zn finger 966..986 CDD:275368
COG5048 990..1374 CDD:227381
C2H2 Zn finger 994..1014 CDD:275368
C2H2 Zn finger 1022..1042 CDD:275368
C2H2 Zn finger 1050..1070 CDD:275368
C2H2 Zn finger 1078..1098 CDD:275368
C2H2 Zn finger 1106..1126 CDD:275368
C2H2 Zn finger 1134..1154 CDD:275368
C2H2 Zn finger 1162..1182 CDD:275368
C2H2 Zn finger 1190..1210 CDD:275368
COG5048 1214..1641 CDD:227381
C2H2 Zn finger 1218..1238 CDD:275368
C2H2 Zn finger 1246..1266 CDD:275368
C2H2 Zn finger 1274..1294 CDD:275368
C2H2 Zn finger 1302..1322 CDD:275368
C2H2 Zn finger 1330..1350 CDD:275368
C2H2 Zn finger 1358..1378 CDD:275368
C2H2 Zn finger 1386..1406 CDD:275368
C2H2 Zn finger 1414..1434 CDD:275368
C2H2 Zn finger 1442..1462 CDD:275368
C2H2 Zn finger 1470..1490 CDD:275368
C2H2 Zn finger 1498..1518 CDD:275368
C2H2 Zn finger 1550..1570 CDD:275368
C2H2 Zn finger 1578..1595 CDD:275368
C2H2 Zn finger 1606..1626 CDD:275368
C2H2 Zn finger 1634..1654 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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