DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and LOC100330167

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_005174611.1 Gene:LOC100330167 / 100330167 -ID:- Length:325 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381
C2H2 Zn finger 121..141 CDD:275368
zf-H2C2_2 133..158 CDD:290200
C2H2 Zn finger 149..169 CDD:275368
zf-H2C2_2 162..185 CDD:290200
C2H2 Zn finger 177..197 CDD:275368
C2H2 Zn finger 205..225 CDD:275368
zf-C2H2_8 206..286 CDD:292531
C2H2 Zn finger 233..253 CDD:275368
C2H2 Zn finger 260..297 CDD:275368
C2H2 Zn finger 303..323 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
LOC100330167XP_005174611.1 zf-C2H2 86..108 CDD:278523
C2H2 Zn finger 88..108 CDD:275368
COG5048 <91..218 CDD:227381
zf-H2C2_2 100..125 CDD:290200
C2H2 Zn finger 116..164 CDD:275368
C2H2 Zn finger 144..161 CDD:275368
C2H2 Zn finger 172..192 CDD:275368
C2H2 Zn finger 200..220 CDD:275368
zf-H2C2_2 213..237 CDD:290200
C2H2 Zn finger 228..248 CDD:275368
C2H2 Zn finger 256..276 CDD:275368
C2H2 Zn finger 284..304 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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