DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and gb:ai877918

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_005161012.1 Gene:gb:ai877918 / 100149758 ZFINID:ZDB-GENE-090506-8 Length:460 Species:Danio rerio


Alignment Length:420 Identity:115/420 - (27%)
Similarity:181/420 - (43%) Gaps:91/420 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QVEKHDPLSNTICKSC-LEDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAER 89
            |.|:....|.|..:.| ::|.       ||.|:...|..  |..|.::.|      :||:.|.:.
Zfish    14 QTEEQTVKSETEEEPCRIKDE-------ETEEQIGHFEE--KPCRRKDEE------TEELIAVKM 63

  Fly    90 DL-QDGADDVDSGNEPDINECDIK--------------AKEKP---GFSCSHCPKSFQVKSNLKV 136
            :: |:.....|...|..|.|.:.|              ::|.|   .|||:.|.|::..|:.|:.
Zfish    64 EIKQETWRSKDEETEEQIEEDEPKQPHPITNEDGNTANSQESPLKKTFSCAECEKTYLTKAALRA 128

  Fly   137 HMRSHTGERP-FTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERR 200
            |||.|.|::| |.|:.|.||:...:.|..||:.|.||:.|.|..|.:.:.....||||::||...
Zfish   129 HMRVHDGKKPEFACAQCEKSYVNQAELNRHMQAHIGEKRFVCKQCGKRYLHKATLKAHMKMHNGN 193

  Fly   201 GSLRCPYCQKCFLTSLILKQHLA----------------------------THTDETQFKCSQCS 237
            ....|.:|.|.|:...:|..|::                            :||.|..|.|::|.
Zfish   194 KPYSCTHCDKRFVYKSVLIAHMSVHDKKSSTARSQCNSGSTCDAHLSVHMNSHTREKPFACNKCG 258

  Fly   238 KSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNAR-----CS-------QSSKA 289
            |.|:.::.|..|.::|. .:.|:|.||.|.|...:.|:.||..:|.     |:       |.|..
Zfish   259 KRFKYKNTLHEHHKLHAGAKPFSCDHCDKTFIWASQLRSHLKYHAGVKSHVCTFCGKDFLQVSHL 323

  Fly   290 SAHKTLGHS--KALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSG---------SKPAH 343
            :.|:.: |:  :..||..|.|.||..|.|..|.|.||:.|   :..|...|         .....
Zfish   324 TVHQRI-HTGERPFKCSYCEKGFTSSSILKNHQKVHTREK---QYQCTHCGRCFSYLSVFKSHLK 384

  Fly   344 SNAQRKPFKCSSCPRTFSRKSALLTHLQTH 373
            ::...||:||:.|.::|:..|||..|.:.|
Zfish   385 THEGEKPYKCAHCEKSFTYSSALKVHERVH 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 10/37 (27%)
COG5048 <119..241 CDD:227381 46/150 (31%)
C2H2 Zn finger 121..141 CDD:275368 8/19 (42%)
zf-H2C2_2 133..158 CDD:290200 12/25 (48%)
C2H2 Zn finger 149..169 CDD:275368 7/19 (37%)
zf-H2C2_2 162..185 CDD:290200 9/22 (41%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 6/47 (13%)
zf-C2H2_8 206..286 CDD:292531 27/120 (23%)
C2H2 Zn finger 233..253 CDD:275368 6/19 (32%)
C2H2 Zn finger 260..297 CDD:275368 13/48 (27%)
C2H2 Zn finger 303..323 CDD:275368 9/19 (47%)
C2H2 Zn finger 353..373 CDD:275368 7/19 (37%)
gb:ai877918XP_005161012.1 C2H2 Zn finger 113..133 CDD:275368 8/19 (42%)
C2H2 Zn finger 142..162 CDD:275368 7/19 (37%)
C2H2 Zn finger 170..190 CDD:275368 6/19 (32%)
COG5048 <186..439 CDD:227381 61/233 (26%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
zf-H2C2_2 238..263 CDD:290200 8/24 (33%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
C2H2 Zn finger 310..330 CDD:275368 4/20 (20%)
zf-H2C2_2 322..347 CDD:290200 7/25 (28%)
C2H2 Zn finger 338..358 CDD:275368 9/19 (47%)
C2H2 Zn finger 366..386 CDD:275368 2/19 (11%)
C2H2 Zn finger 394..414 CDD:275368 7/19 (37%)
C2H2 Zn finger 422..442 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.