DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Neu2 and znf1010

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_009289662.1 Gene:znf1010 / 100148686 ZFINID:ZDB-GENE-131120-161 Length:327 Species:Danio rerio


Alignment Length:359 Identity:108/359 - (30%)
Similarity:150/359 - (41%) Gaps:83/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDLQDGA-----------D 96
            |||:...|:|               |.:||:|   ...|||.|......:.|:           .
Zfish    22 EDAEQQTDLI---------------VPKEEAE---ESTSEEKEKPHICSECGSSFTSKLSLYLHS 68

  Fly    97 DVDSGNE----PDINEC---------DIKAK--EKPGFSCSHCPKSFQVKSNLKVHMRSHTGERP 146
            .:.:|.:    .|..:|         .:|..  ||| |:|..|.|||..:.|||.||::|.||:|
Zfish    69 RIHTGEKLFTCQDCGKCFSQQGNFMYHVKTHTGEKP-FTCQQCGKSFITEGNLKTHMKTHAGEKP 132

  Fly   147 FTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKC 211
            |||..|.|||........|||.||||:||.|..|.:||:...|||.|::.|.......|..|.|.
Zfish   133 FTCKECGKSFSQHGHFVYHMRIHTGEKPFACQQCGKSFSTNGHLKVHMRFHTGEKPFSCQQCGKS 197

  Fly   212 FLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVH-QERLFTCGHCSKDFALHAYLKR 275
            |..:..||.|:..||.|..:.|:||.|||..:..|:.|..:| :|:.::|..|.|.|.....|.|
Zfish   198 FTENASLKAHMNVHTGEKPYSCTQCGKSFPYKRSLYSHQALHMEEKPYSCSQCEKSFINQGDLNR 262

  Fly   276 HLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSK 340
            ||          |....:.|     ..|..|..:.|.:..|..|:..||                
Zfish   263 HL----------KVHTGENL-----YICSLCGVSVTTKRNLECHMNVHT---------------- 296

  Fly   341 PAHSNAQRKPFKCSSCPRTFSRKSALLTHLQTHT 374
                  .:|||.|..|.::|....:|..|.:||:
Zfish   297 ------DKKPFSCLQCGKSFRHSGSLTRHNKTHS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 5/19 (26%)
COG5048 <119..241 CDD:227381 55/121 (45%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..158 CDD:290200 16/24 (67%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 8/19 (42%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
zf-C2H2_8 206..286 CDD:292531 27/80 (34%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..297 CDD:275368 10/36 (28%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368 5/19 (26%)
znf1010XP_009289662.1 C2H2 Zn finger 51..71 CDD:275368 1/19 (5%)
C2H2 Zn finger 79..99 CDD:275368 3/19 (16%)
zf-H2C2_2 91..116 CDD:290200 10/25 (40%)
C2H2 Zn finger 107..127 CDD:275368 10/19 (53%)
COG5048 <119..311 CDD:227381 76/228 (33%)
zf-H2C2_2 119..144 CDD:290200 16/24 (67%)
C2H2 Zn finger 135..155 CDD:275368 8/19 (42%)
zf-H2C2_2 147..172 CDD:290200 13/24 (54%)
C2H2 Zn finger 163..183 CDD:275368 8/19 (42%)
zf-H2C2_2 175..199 CDD:290200 8/23 (35%)
C2H2 Zn finger 191..211 CDD:275368 7/19 (37%)
zf-H2C2_2 203..226 CDD:290200 10/22 (45%)
C2H2 Zn finger 219..239 CDD:275368 8/19 (42%)
DUF4764 <243..>269 CDD:292583 9/35 (26%)
C2H2 Zn finger 247..267 CDD:275368 9/29 (31%)
C2H2 Zn finger 275..295 CDD:275368 5/19 (26%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.