DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and si:dkey-77f5.4

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_009289663.1 Gene:si:dkey-77f5.4 / 100147955 ZFINID:ZDB-GENE-131121-70 Length:456 Species:Danio rerio


Alignment Length:268 Identity:94/268 - (35%)
Similarity:134/268 - (50%) Gaps:28/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRS 183
            |:|..|.|.:.:|.||.:||||||.|:|:||..|.|||...:.|..|:|.||||:.|.|..|.:|
Zfish   148 FTCGQCGKGYSIKGNLDIHMRSHTEEKPYTCPHCGKSFVRKNTLHAHVRIHTGEKLFACPQCEKS 212

  Fly   184 FTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWM 248
            |:....||.|:::|.......|..|.:.|.....|..|...||.|....|.||.|||..:|.|.:
Zfish   213 FSLQGQLKIHMRIHLETKPYSCSQCGRSFYDKKSLDVHTRIHTGEKPHTCPQCGKSFVHKHSLRI 277

  Fly   249 HMRVHQ-ERLFTCGHCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTD 312
            |.|.|. :||.:|..|.:.|::.|.||.|:               :|....|.:.||:|.|:|.:
Zfish   278 HSRFHSGQRLLSCQECGRCFSIKANLKAHM---------------RTHTGEKLVTCGQCGKSFAN 327

  Fly   313 RSALSTHLKSHTKNKPLLEGPCK-------SSGSKPAH--SNAQRKPFKCSSCPRTFSRKSALLT 368
            :|.|:||::.||..:|.:   ||       ..|:..||  ::...||:.|..|..||.....|..
Zfish   328 QSYLTTHMRIHTGERPFV---CKECGKGFHKRGNLTAHMRTHTGEKPYSCKICEETFRSTQTLKG 389

  Fly   369 HLQTHTGK 376
            |:..||.:
Zfish   390 HMSVHTAE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071
COG5048 <119..241 CDD:227381 50/121 (41%)
C2H2 Zn finger 121..141 CDD:275368 9/19 (47%)
zf-H2C2_2 133..158 CDD:290200 16/24 (67%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 11/22 (50%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 5/19 (26%)
zf-C2H2_8 206..286 CDD:292531 27/80 (34%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 9/19 (47%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
si:dkey-77f5.4XP_009289663.1 COG5048 82..441 CDD:227381 94/268 (35%)
C2H2 Zn finger 94..114 CDD:275368
zf-H2C2_2 106..131 CDD:290200
C2H2 Zn finger 122..142 CDD:275368
C2H2 Zn finger 150..170 CDD:275368 9/19 (47%)
zf-H2C2_2 162..187 CDD:290200 16/24 (67%)
CpXC 177..>222 CDD:291051 20/44 (45%)
C2H2 Zn finger 178..198 CDD:275368 8/19 (42%)
C2H2 Zn finger 206..226 CDD:275368 7/19 (37%)
SIR2 <221..>273 CDD:294129 16/51 (31%)
C2H2 Zn finger 234..254 CDD:275368 5/19 (26%)
zf-H2C2_2 246..271 CDD:290200 11/24 (46%)
C2H2 Zn finger 262..282 CDD:275368 10/19 (53%)
C2H2 Zn finger 290..310 CDD:275368 7/34 (21%)
zf-H2C2_2 302..327 CDD:290200 10/39 (26%)
C2H2 Zn finger 318..338 CDD:275368 9/19 (47%)
zf-H2C2_2 330..354 CDD:290200 8/26 (31%)
C2H2 Zn finger 346..366 CDD:275368 5/19 (26%)
zf-H2C2_2 358..383 CDD:290200 8/24 (33%)
C2H2 Zn finger 374..394 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000003
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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