DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and zgc:174646

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001116087.2 Gene:zgc:174646 / 100142637 ZFINID:ZDB-GENE-080305-6 Length:436 Species:Danio rerio


Alignment Length:383 Identity:123/383 - (32%)
Similarity:174/383 - (45%) Gaps:83/383 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDIN 107
            ||.|...|:|:.||.|.:.:| :|...:...|.||.                             
Zfish    22 EDLQEQTDLIKDYEESKEEHR-VKIEGKTHLETDGI----------------------------- 56

  Fly   108 ECDIKAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGE 172
               :|.::|..|:|:.|.||...||.||:|||.|||||||||:.|.|||.:.:.|..||..||||
Zfish    57 ---LKMRDKSCFTCTQCGKSLANKSKLKIHMRIHTGERPFTCTQCGKSFCHLANLNQHMMIHTGE 118

  Fly   173 RPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCS 237
            :||.|:.|.:||:...:|..|:.:|.......|..|.|.|..|..|.:|:..||.|..|.|:||.
Zfish   119 KPFTCTQCGKSFSHSANLNQHMMIHTGEKPFTCHQCGKSFSKSSTLYRHMRIHTGEQPFTCTQCG 183

  Fly   238 KSFQVEHELWMHMRVHQ-----------------------------ERLFTCGHCSKDFALHAYL 273
            |||.....|::|||:|.                             |:.|||..|.:.|:|.:.|
Zfish   184 KSFNQPSNLYLHMRIHTGEKPFTCTQCGKNFIHSSHLNEHMMIHTGEKPFTCTQCGRSFSLSSTL 248

  Fly   274 KRHLSRN--------ARC----SQSSKASAHKTL--GHSKALKCGKCPKTFTDRSALSTHLKSHT 324
            .||:..:        .:|    |||:..:.|..:  |.| ...|.:|.|:|:..|.|:.||:.||
Zfish   249 NRHMRIHTGEKPFTCTQCGKSFSQSASLNRHMRIHTGES-PFTCTQCGKSFSLSSYLNKHLRIHT 312

  Fly   325 KNKPLLEGPCKSSGSKPAHSNA------QRKPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            ..||.....|..|....:|.|.      :.|||.|:.|.::|...|:|..|:..|||:
Zfish   313 GEKPFTCTRCGKSFRHSSHLNQHMMIHNREKPFTCTCCGKSFRHSSSLNQHMMIHTGE 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262 8/19 (42%)
COG5048 <119..241 CDD:227381 57/121 (47%)
C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-H2C2_2 133..156 CDD:463886 16/22 (73%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:463886 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 7/19 (37%)
zf-C2H2_8 206..286 CDD:464935 33/120 (28%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 12/50 (24%)
C2H2 Zn finger 303..323 CDD:275368 8/19 (42%)
C2H2 Zn finger 353..373 CDD:275368 6/19 (32%)
zgc:174646NP_001116087.2 None

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