DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and znf1069

DIOPT Version :9

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001103337.1 Gene:znf1069 / 100126141 ZFINID:ZDB-GENE-071004-89 Length:363 Species:Danio rerio


Alignment Length:362 Identity:112/362 - (30%)
Similarity:165/362 - (45%) Gaps:53/362 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 EDAQNAFDIIETYERSHQFYRFLKDVREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDIN 107
            ||.|...|::...|.:||.     :|.||:.:.:..                 .|:.:..:|.:.
Zfish    22 EDLQEQTDLMVLKEETHQL-----NVMEEKQQFEKH-----------------QDITTDEKPTLT 64

  Fly   108 ECDI------KAKEKPGFSCSHCPKSFQVKSNLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHM 166
            :...      |:|....|||:.|.|||..|..|.||:|.|||.:|:||..|.|||......:.||
Zfish    65 KKTSSRGRPRKSKSGCNFSCTRCRKSFSQKPKLDVHIRVHTGGKPYTCEQCGKSFSQKQSFKTHM 129

  Fly   167 RTHTGERPFQCSHCPRSFTAGHHLKAHIQMHERRGSLRCPYCQKCFLTSLILKQHLATHTDETQF 231
            |.||||||:.|..|.:||....:..||.::|.......|..|.|.|..:..|..|:..||.|..:
Zfish   130 RIHTGERPYTCQQCGKSFNHAGNFAAHKRIHTGERKYTCQQCGKSFYNTGNLAVHMRIHTGEEPY 194

  Fly   232 KCSQCSKSFQVEHELWMHMRVHQ-ERLFTCGHCSKDFA----LHAYLKRHLSRNA-RCSQSSKAS 290
            .||||..||:....|.:|||.|. ||.|||..|.|.|:    |..:::.|..... :|::..|:.
Zfish   195 SCSQCGNSFKQNVTLKIHMRTHTGERRFTCTQCGKSFSQKQDLGIHMRIHTGEKPYKCTECGKSF 259

  Fly   291 AHK-TLGH-------SKALKCGKCPKTFTDRSALSTHLKSHTKNKPLLEGPCKSSGSKPAHSNAQ 347
            .:| ||.|       .|...|.:|.|:||.::.|..|:..||..   :...|...|....|.::.
Zfish   260 PYKSTLKHHMISHTGEKPFACVQCGKSFTTKANLMNHMNGHTGT---IVFRCDQCGKTLTHKDSI 321

  Fly   348 R--------KPFKCSSCPRTFSRKSALLTHLQTHTGK 376
            :        :.|:||.|.:.|..|.:|.||::.|.|:
Zfish   322 KNHMKTHSVECFRCSKCGKDFKHKRSLNTHMRLHNGE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:285071 7/19 (37%)
COG5048 <119..241 CDD:227381 52/121 (43%)
C2H2 Zn finger 121..141 CDD:275368 10/19 (53%)
zf-H2C2_2 133..158 CDD:290200 14/24 (58%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:290200 12/22 (55%)
C2H2 Zn finger 177..197 CDD:275368 6/19 (32%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:292531 30/85 (35%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 11/42 (26%)
C2H2 Zn finger 303..323 CDD:275368 7/19 (37%)
C2H2 Zn finger 353..373 CDD:275368 8/19 (42%)
znf1069NP_001103337.1 C2H2 Zn finger 84..104 CDD:275368 10/19 (53%)
COG5048 <88..329 CDD:227381 83/243 (34%)
zf-H2C2_2 97..121 CDD:290200 14/23 (61%)
C2H2 Zn finger 112..132 CDD:275368 8/19 (42%)
zf-H2C2_2 124..149 CDD:290200 13/24 (54%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
C2H2 Zn finger 168..188 CDD:275368 6/19 (32%)
zf-H2C2_2 180..205 CDD:290200 11/24 (46%)
C2H2 Zn finger 196..216 CDD:275368 10/19 (53%)
zf-H2C2_2 209..233 CDD:290200 13/23 (57%)
C2H2 Zn finger 224..244 CDD:275368 5/19 (26%)
zf-H2C2_2 236..259 CDD:290200 4/22 (18%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
zf-H2C2_2 265..289 CDD:290200 7/23 (30%)
C2H2 Zn finger 280..300 CDD:275368 7/19 (37%)
C2H2 Zn finger 308..328 CDD:275368 3/19 (16%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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