DRSC/TRiP Functional Genomics Resources

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Protein Alignment Neu2 and LOC100007471

DIOPT Version :10

Sequence 1:NP_649316.1 Gene:Neu2 / 40375 FlyBaseID:FBgn0037085 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_021326585.1 Gene:LOC100007471 / 100007471 -ID:- Length:276 Species:Danio rerio


Alignment Length:261 Identity:89/261 - (34%)
Similarity:125/261 - (47%) Gaps:24/261 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VREEESENDGSGCSEEVEAAERDLQDGADDVDSGNEPDINECDIKAKEKPGFSCSHCPKSFQVKS 132
            |:..|.:.:.:..::|.|......::..|..:||.|        |..||..|:||.|.|:|....
Zfish    19 VKHAEQQTELTSLNDECEDLNEIKEEDQDGQNSGVE--------KPPEKARFTCSQCGKTFLHHG 75

  Fly   133 NLKVHMRSHTGERPFTCSLCPKSFGYSSGLQNHMRTHTGERPFQCSHCPRSFTAGHHLKAHIQMH 197
            .||.|:|.||||:||||..|.|||..:..|:.|:|.|:||:|:.|..|.:||.....||.|:::|
Zfish    76 KLKDHLRIHTGEKPFTCPQCGKSFNKNGNLKVHLRIHSGEKPYPCPQCGKSFYLRIKLKVHMRVH 140

  Fly   198 ERRGSLRCPYCQKCFLTSLILKQHLATHTDETQFKCSQCSKSFQVEHELWMHMRVHQ-ERLFTCG 261
            .......||.|.|.|........|:..||.|..:.|.||.|||..:..|.:|||||. |:.|||.
Zfish   141 TGESPFTCPQCGKSFKQRGNFVNHIRIHTGEKPYICQQCGKSFHQDGGLKVHMRVHTGEKPFTCQ 205

  Fly   262 HCSKDFALHAYLKRHLSRNARCSQSSKASAHKTLGHSKALKCGKCPKTFTDRSALSTHLKSHTKN 326
            .|.|.|.|...||.|:..:.              |.| ...|.:|..:|..:.:|..|.:.|:..
Zfish   206 QCGKSFNLQGNLKVHMRVHT--------------GES-PFTCTQCGLSFRQKISLKRHWRIHSAG 255

  Fly   327 K 327
            |
Zfish   256 K 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Neu2NP_649316.1 zf-AD 1..63 CDD:462262
COG5048 <119..241 CDD:227381 51/121 (42%)
C2H2 Zn finger 121..141 CDD:275368 9/19 (47%)
zf-H2C2_2 133..156 CDD:463886 14/22 (64%)
C2H2 Zn finger 149..169 CDD:275368 8/19 (42%)
zf-H2C2_2 162..185 CDD:463886 10/22 (45%)
C2H2 Zn finger 177..197 CDD:275368 7/19 (37%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
zf-C2H2_8 206..286 CDD:464935 31/80 (39%)
C2H2 Zn finger 233..253 CDD:275368 10/19 (53%)
C2H2 Zn finger 260..297 CDD:275368 8/36 (22%)
C2H2 Zn finger 303..323 CDD:275368 5/19 (26%)
C2H2 Zn finger 353..373 CDD:275368
LOC100007471XP_021326585.1 C2H2 Zn finger 64..84 CDD:275368 9/19 (47%)
COG5048 <88..248 CDD:227381 61/174 (35%)
C2H2 Zn finger 92..112 CDD:275368 8/19 (42%)
C2H2 Zn finger 120..140 CDD:275368 7/19 (37%)
C2H2 Zn finger 148..168 CDD:275368 6/19 (32%)
C2H2 Zn finger 176..196 CDD:275368 10/19 (53%)
C2H2 Zn finger 204..224 CDD:275368 8/19 (42%)
C2H2 Zn finger 232..252 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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